RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MAXP61244 160 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 PCDH1Q08174 1060 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ZBTB6Q15916 424 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 EML3Q32P44 896 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 SULT1C3Q6IMI6 304 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 TPRG1Q6ZUI0 275 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 GPAT4Q86UL3 456 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ZNF565Q8N9K5 539 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ZSWIM2Q8NEG5 633 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 OR52K1Q8NGK4 314 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 OR5M3Q8NGP4 307 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 OR4C6Q8NH72 309 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 CPT1CQ8TCG5 803 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 DNAJC9Q8WXX5 260 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 NANOS1Q8WY41 292 aaKnown RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 OTUB2Q96DC9 234 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 SLC47A1Q96FL8 570 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 ZNF514Q96K75 400 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 PTPN18Q99952 460 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 NAA11Q9BSU3 229 aaPredicted RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 LGR4Q9BXB1 951 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 EPB41L1Q9H4G0 881 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 TRPV4Q9HBA0 871 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 IL1RAPQ9NPH3 570 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 TAS2R14Q9NYV8 317 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 SRRDQ9UH36 339 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 R3HDM2Q9Y2K5 976 aaKnown RBP5.65□□□□□ -1.5
HERC4-206ENST00000427635 GRIP1Q9Y3R0 1128 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 GMPPBQ9Y5P6 360 aa5.65□□□□□ -1.5
HERC4-206ENST00000427635 PXDNLA1KZ92 1463 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 PRDM15P57071 1507 aaPredicted RBP5.65□□□□□ -1.51
HERC4-206ENST00000427635 FTCDNL1E5RQL4 147 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 PSMD11O00231 422 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 SMAD7O15105 426 aaKnown RBP5.65□□□□□ -1.51
HERC4-206ENST00000427635 CHADO15335 359 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 MPPED1O15442 326 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 PDYNP01213 254 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 ECHS1P30084 290 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 ZNF84P51523 738 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 TNK2Q07912 1038 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 ENPP2Q13822 863 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 RUNX2Q13950 521 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 NR0B2Q15466 257 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 SLC1A5Q15758 541 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 MAPK11Q15759 364 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 CPSF6Q16630 551 aaKnown RBP eCLIP5.65□□□□□ -1.51
HERC4-206ENST00000427635 ARSIQ5FYB1 569 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 GTF2IRD2BQ6EKJ0 949 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 DENND5AQ6IQ26 1287 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 CCBE1Q6UXH8 406 aaPredicted RBP5.65□□□□□ -1.51
HERC4-206ENST00000427635 GTF2IRD2Q86UP8 949 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 PIGZQ86VD9 579 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 MMAAQ8IVH4 418 aaKnown RBP5.65□□□□□ -1.51
HERC4-206ENST00000427635 ALDH16A1Q8IZ83 802 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 C8orf59Q8N0T1 100 aaPredicted RBP5.65□□□□□ -1.51
HERC4-206ENST00000427635 ANKK1Q8NFD2 765 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 CASKIN2Q8WXE0 1202 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 QKIQ96PU8 341 aaKnown RBP eCLIP5.65□□□□□ -1.512e-6■■■■■ 30.4
HERC4-206ENST00000427635 OR52E6Q96RD3 313 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 CCNL2Q96S94 520 aaPredicted RBP5.65□□□□□ -1.51
HERC4-206ENST00000427635 FAM83CQ9BQN1 747 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 NELFAQ9H3P2 528 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 RIOX1Q9H6W3 641 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 TRIM39Q9HCM9 518 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 CCDC167Q9P0B6 97 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 GTF2IRD1Q9UHL9 959 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 ZNF222Q9UK12 451 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 PCDHGB2Q9Y5G2 931 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 FRMPD1Q5SYB0 1578 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 INO80Q9ULG1 1556 aaPredicted RBP5.65□□□□□ -1.51
HERC4-206ENST00000427635 SMCO3A2RU48 225 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 SIGLEC16A6NMB1 481 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 E9PAM4 449 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 CDC7O00311 574 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 PDCD5O14737 125 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 PCDHGA12O60330 932 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 CER1O95813 267 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 CYP11A1P05108 521 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 GP1BBP13224 206 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 GLRA2P23416 452 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 TNFSF4P23510 183 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 RCAN2Q14206 197 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 DECR1Q16698 335 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 TTMPQ5BVD1 217 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 C3orf33Q6P1S2 294 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 ARHGAP11AQ6P4F7 1023 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 ABRAXAS1Q6UWZ7 409 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 OR2L8Q8NGY9 312 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 XAGE5Q8WWM1 108 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 SEC16BQ96JE7 1060 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 FCRL2Q96LA5 508 aaPredicted RBP5.65□□□□□ -1.51
HERC4-206ENST00000427635 WDR77Q9BQA1 342 aaPredicted RBP5.65□□□□□ -1.51
HERC4-206ENST00000427635 CCM2Q9BSQ5 444 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 SLC29A3Q9BZD2 475 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 NCOR1P1Q9H4R4 102 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 ALG2Q9H553 416 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 RXFP1Q9HBX9 757 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 DNAAF2Q9NVR5 837 aaKnown RBP5.65□□□□□ -1.51
HERC4-206ENST00000427635 CD207Q9UJ71 328 aa5.65□□□□□ -1.51
HERC4-206ENST00000427635 POFUT2Q9Y2G5 429 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms