RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 MEIS1O00470 390 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 KHNYNO15037 678 aaKnown RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ADAMTS3O15072 1205 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 SEC14L5O43304 696 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 FZD6O60353 706 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 MPZL2O60487 215 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 TPST1O60507 370 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 HUS1O60921 280 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 LILRA1O75019 489 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 XYLBO75191 536 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 KLHL18O94889 574 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 SCELO95171 688 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 DHFRP00374 187 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 LALBAP00709 142 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 SERPINA1P01009 418 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 RAF1P04049 648 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 C2P06681 752 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 HOXD4P09016 255 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ANXA3P12429 323 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 IFI30P13284 250 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ICAM2P13598 275 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC2A4P14672 509 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 PAMP19021 973 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 EFNA1P20827 205 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 IGFBP5P24593 272 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 PSMA3P25788 255 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 S100PP25815 95 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 IL1R2P27930 398 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 POU1F1P28069 291 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 SDC4P31431 198 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 MSX2P35548 267 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 GGT5P36269 586 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 POLR2IP36954 125 aaKnown RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 CD96P40200 585 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 MTHFRP42898 656 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 GSTM5P46439 218 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 RORCP51449 518 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ACLYP53396 1101 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 RRAS2P62070 204 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 CD83Q01151 205 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC25A11Q02978 314 aaKnown RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 PTSQ03393 145 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 RELQ04864 619 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 PCDH1Q08174 1060 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 CD47Q08722 323 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 DBPQ10586 325 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 LAPTM5Q13571 262 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 NFYCQ13952 458 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 SEMA3AQ14563 771 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF273Q14593 569 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 PON2Q15165 354 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 TRIP4Q15650 581 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPR19Q15760 415 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 TAF12Q16514 161 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 CARTPTQ16568 116 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 DUSP6Q16828 381 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 BCL7AQ4VC05 210 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 INO80DQ53TQ3 878 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 TEX30Q5JUR7 227 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM26DQ5JW98 314 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 DDI2Q5TDH0 399 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 MLIPQ5VWP3 458 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM109BQ6ICB4 259 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 XRRA1Q6P2D8 792 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 USP17L2Q6R6M4 530 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ANGPTL8Q6UXH0 198 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPRIN3Q6ZVF9 776 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 RAB11FIP2Q7L804 512 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC26A9Q7LBE3 791 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 BNIPLQ7Z465 357 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ADGRA1Q86SQ6 560 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 GALNT10Q86SR1 603 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZBTB46Q86UZ6 589 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 MAP4K3Q8IVH8 894 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 IGDCC3Q8IVU1 814 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 NIM1KQ8IY84 436 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 KRT78Q8N1N4 520 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 LIX1Q8N485 282 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 EIF4E3Q8N5X7 224 aaKnown RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 PLD5Q8N7P1 536 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 CELF2-AS1Q8N7Q2 184 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 YIPF7Q8N8F6 280 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 KDF1Q8NAX2 398 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM156AQ8NDB6 213 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF680Q8NEM1 530 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 OR4D10Q8NGI6 311 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 CDC26Q8NHZ8 85 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 RNASE11Q8TAA1 199 aaKnown RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF431Q8TF32 576 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 CHTF18Q8WVB6 975 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 TMBIM1Q969X1 311 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 COA7Q96BR5 231 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 LRRC58Q96CX6 371 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZDHHC12Q96GR4 267 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 GJD4Q96KN9 370 aaPredicted RBP5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 COL21A1Q96P44 957 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 OR2A14Q96R47 310 aa5.52□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF251Q9BRH9 671 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms