RNA–Protein interactions for RNA: ENST00000426343.5

HDLBP-212, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-212ENST00000426343 DEFB109BQ30KR1 87 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 CCDC38Q502W7 563 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 C16orf46Q6P387 395 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 PPP1R21Q6ZMI0 780 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 MICALCLQ6ZW33 695 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 NLRP9Q7RTR0 991 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 OR13J1Q8NGT2 312 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 APOBEC4Q8WW27 367 aaKnown RBP17.27■□□□□ 0.36
HDLBP-212ENST00000426343 TFGQ92734 400 aaPredicted RBP17.27■□□□□ 0.36
HDLBP-212ENST00000426343 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.27■□□□□ 0.369e-8■□□□□ 11.3
HDLBP-212ENST00000426343 RNF31Q96EP0 1072 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 TTC1Q99614 292 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 CASS4Q9NQ75 786 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 RAB6BQ9NRW1 208 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 PAK5Q9P286 719 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 MRPS18BQ9Y676 258 aaKnown RBP17.27■□□□□ 0.36
HDLBP-212ENST00000426343 PRSS21Q9Y6M0 314 aa17.27■□□□□ 0.36
HDLBP-212ENST00000426343 CCDC78A2IDD5 438 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 C21orf140B9A014 251 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 SUV39H1O43463 412 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 KATNA1O75449 491 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 FTH1P02794 183 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 ETS1P14921 441 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 PREPP48147 710 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 ARCN1P48444 511 aaKnown RBP17.26■□□□□ 0.35
HDLBP-212ENST00000426343 PLOD1Q02809 727 aaPredicted RBP17.26■□□□□ 0.35
HDLBP-212ENST00000426343 ACVR1Q04771 509 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 SNX1Q13596 522 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 DNASE1L3Q13609 305 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 TSTD2Q5T7W7 516 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 DRICH1Q6PGQ1 229 aaPredicted RBP17.26■□□□□ 0.35
HDLBP-212ENST00000426343 ATG14Q6ZNE5 492 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 PRICKLE2Q7Z3G6 844 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 CCDC89Q8N998 374 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 PHC3Q8NDX5 983 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 OR52E1Q8NGJ3 308 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 PEX13Q92968 403 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 HDAC10Q969S8 669 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 SGSM3Q96HU1 749 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 GPR87Q9BY21 358 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 SYTL2Q9HCH5 934 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 LATS2Q9NRM7 1088 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 DRG1Q9Y295 367 aaKnown RBP17.26■□□□□ 0.35
HDLBP-212ENST00000426343 ZKSCAN5Q9Y2L8 839 aa17.26■□□□□ 0.35
HDLBP-212ENST00000426343 ZNF106Q9H2Y7 1883 aaKnown RBP17.25■□□□□ 0.35
HDLBP-212ENST00000426343 OR51F1A6NGY5 319 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 SLC9B1P1A6NJY1 282 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 F8W8V4 182 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 BTN3A3O00478 584 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 NTRK1P04629 796 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 OR56A5P0C7T3 313 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 MSL3P1P0C860 447 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 CDH3P22223 829 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 PRDX3P30048 256 aaKnown RBP17.25■□□□□ 0.35
HDLBP-212ENST00000426343 GRIA1P42261 906 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 SIX1Q15475 284 aaPredicted RBP17.25■□□□□ 0.35
HDLBP-212ENST00000426343 AFTPHQ6ULP2 937 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 C4orf22Q6V702 233 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 AMIGO1Q86WK6 493 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 OR4L1Q8NH43 312 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 CT55Q8WUE5 264 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 ZNF501Q96CX3 271 aaPredicted RBP17.25■□□□□ 0.35
HDLBP-212ENST00000426343 PPM1MQ96MI6 270 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 SOHLH2Q9NX45 425 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 BOD1L1Q8NFC6 3051 aa17.25■□□□□ 0.35
HDLBP-212ENST00000426343 BSNQ9UPA5 3926 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 SLC5A10A0PJK1 596 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 GSAPA4D1B5 854 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 BTN3A1O00481 513 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 MAP3K7O43318 606 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 CPNE3O75131 537 aaKnown RBP17.24■□□□□ 0.35
HDLBP-212ENST00000426343 CREG1O75629 220 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 GOT2P00505 430 aaKnown RBP17.24■□□□□ 0.35
HDLBP-212ENST00000426343 APRTP07741 180 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 CCDC175P0C221 793 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 ACADLP28330 430 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 RPL22P35268 128 aaKnown RBP17.24■□□□□ 0.35
HDLBP-212ENST00000426343 PPARGP37231 505 aaPredicted RBP17.24■□□□□ 0.35
HDLBP-212ENST00000426343 NFKB2Q00653 900 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 ERV3-1Q14264 604 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 GPR19Q15760 415 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 ATP1A1-AS1Q5TC04 95 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 FBXO38Q6PIJ6 1188 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 PRUNE1Q86TP1 453 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 MAIP1Q8WWC4 291 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 SEC14L1Q92503 715 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 ELMO1Q92556 727 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 LRFN5Q96NI6 719 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 PITPNM3Q9BZ71 974 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 FANCEQ9HB96 536 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 SLC2A6Q9UGQ3 507 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 POLG2Q9UHN1 485 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 POLHQ9Y253 713 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 TCAF1Q9Y4C2 921 aa17.24■□□□□ 0.35
HDLBP-212ENST00000426343 PIPSLA2A3N6 862 aa17.23■□□□□ 0.35
HDLBP-212ENST00000426343 C2orf74A8MZ97 194 aa17.23■□□□□ 0.35
HDLBP-212ENST00000426343 SCRG1O75711 98 aa17.23■□□□□ 0.35
HDLBP-212ENST00000426343 PRKG2Q13237 762 aa17.23■□□□□ 0.35
HDLBP-212ENST00000426343 ZNF534Q76KX8 674 aa17.23■□□□□ 0.35
HDLBP-212ENST00000426343 TMEM126BQ8IUX1 230 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms