RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PPFIBP2Q8ND30 876 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 HM13Q8TCT9 377 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 SCARF2Q96GP6 870 aaPredicted RBP13.14□□□□□ -0.31
PRPF39-202ENST00000424478 ZNF514Q96K75 400 aaPredicted RBP13.14□□□□□ -0.31
PRPF39-202ENST00000424478 ZC3H10Q96K80 434 aaKnown RBP13.14□□□□□ -0.31
PRPF39-202ENST00000424478 C12orf66Q96MD2 445 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 INSM2Q96T92 566 aaPredicted RBP13.14□□□□□ -0.31
PRPF39-202ENST00000424478 HGH1Q9BTY7 390 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 OR52A5Q9H2C5 316 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 SYTL2Q9HCH5 934 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 RXFP3Q9NSD7 469 aa13.14□□□□□ -0.31
PRPF39-202ENST00000424478 DLL1O00548 723 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 PLIN3O60664 434 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 SIX3O95343 332 aaPredicted RBP13.13□□□□□ -0.31
PRPF39-202ENST00000424478 GNSP15586 552 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 AGTR2P50052 363 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 DNAJC3Q13217 504 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 TECRLQ5HYJ1 363 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 METRNLQ641Q3 311 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 SBSNQ6UWP8 590 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 PRR23CQ6ZRP0 262 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 FAM46DQ8NEK8 389 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 ALKBH8Q96BT7 664 aaKnown RBP13.13□□□□□ -0.31
PRPF39-202ENST00000424478 RABEP2Q9H5N1 569 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.13□□□□□ -0.31
PRPF39-202ENST00000424478 RNF112Q9ULX5 631 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 ASF1AQ9Y294 204 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 GLRA3O75311 464 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 SLCO2B1O94956 709 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 PROCP04070 461 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 TSTA3Q13630 321 aaPredicted RBP13.13□□□□□ -0.31
PRPF39-202ENST00000424478 TTLL9Q3SXZ7 439 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 CES4AQ5XG92 561 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 UBE2R2Q712K3 238 aaPredicted RBP13.13□□□□□ -0.31
PRPF39-202ENST00000424478 OXR1Q8N573 874 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 LINC00615Q96LM1 132 aaPredicted RBP13.13□□□□□ -0.31
PRPF39-202ENST00000424478 SHCBP1LQ9BZQ2 653 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 ZDHHC5Q9C0B5 715 aa13.13□□□□□ -0.31
PRPF39-202ENST00000424478 ARHGEF33A8MVX0 844 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 SUPT3HB4E1H0 165 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 SUPT3HO75486 399 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 CSF2P04141 144 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 HOXC4P09017 264 aaPredicted RBP13.12□□□□□ -0.31
PRPF39-202ENST00000424478 MPLP40238 635 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 GDF5P43026 501 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 RGS4P49798 205 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 SF3A2Q15428 464 aaKnown RBP13.12□□□□□ -0.31
PRPF39-202ENST00000424478 AGAP9Q5VTM2 703 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 ZC3H14Q6PJT7 736 aaKnown RBP13.12□□□□□ -0.31
PRPF39-202ENST00000424478 C10orf107Q8IVU9 208 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 NKAPQ8N5F7 415 aaKnown RBP13.12□□□□□ -0.31
PRPF39-202ENST00000424478 ACMSDQ8TDX5 336 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 PYCR2Q96C36 320 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 TSNARE1Q96NA8 513 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 TSSK1BQ9BXA7 367 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 DERL2Q9GZP9 239 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 XKR8Q9H6D3 395 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 TAAR2Q9P1P5 351 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 SMG5Q9UPR3 1016 aaKnown RBP13.12□□□□□ -0.31
PRPF39-202ENST00000424478 SLC35G4P0C7Q5 338 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 ILF3Q12906 894 aaKnown RBP eCLIP13.12□□□□□ -0.31
PRPF39-202ENST00000424478 GBX1Q14549 363 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 SHBQ15464 509 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 PFKFB4Q16877 469 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 ZXDCQ2QGD7 858 aaPredicted RBP13.12□□□□□ -0.31
PRPF39-202ENST00000424478 HLA-BQ31612 363 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 PLEKHS1Q5SXH7 462 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 SLC22A15Q8IZD6 547 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 ZNF548Q8NEK5 533 aaPredicted RBP13.12□□□□□ -0.31
PRPF39-202ENST00000424478 DCDC2Q9UHG0 476 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 PDE10AQ9Y233 779 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 PTPRZ1P23471 2315 aaPredicted RBP13.12□□□□□ -0.31
PRPF39-202ENST00000424478 NME1P15531 152 aaKnown RBP13.12□□□□□ -0.31
PRPF39-202ENST00000424478 NUDT1P36639 197 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 CTSKP43235 329 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 ETV4P43268 484 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 DCBLD1Q8N8Z6 715 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 DENND1AQ8TEH3 1009 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 TFGQ92734 400 aaPredicted RBP13.12□□□□□ -0.31
PRPF39-202ENST00000424478 PHOX2BQ99453 314 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 ATG10Q9H0Y0 220 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 FAM53CQ9NYF3 392 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 SENP1Q9P0U3 644 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 DGKBQ9Y6T7 804 aa13.12□□□□□ -0.31
PRPF39-202ENST00000424478 ASCC3Q8N3C0 2202 aaKnown RBP13.11□□□□□ -0.31
PRPF39-202ENST00000424478 G3V2L1 256 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 QSOX1O00391 747 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 TNFRSF10CO14798 259 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 LIN7AO14910 233 aaPredicted RBP13.11□□□□□ -0.31
PRPF39-202ENST00000424478 YY2O15391 372 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 DLX3O60479 287 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 MTHFD2P13995 350 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 PCLAFQ15004 111 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 FRA10AC1Q70Z53 315 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 ATOH8Q96SQ7 321 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 TIMM29Q9BSF4 260 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 GAREM1Q9H706 876 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 POPDC3Q9HBV1 291 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 ZNF624Q9P2J8 865 aaPredicted RBP13.11□□□□□ -0.31
PRPF39-202ENST00000424478 RP1P56715 2156 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms