RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 ZNF679Q8IYX0 411 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 DCP1BQ8IZD4 617 aaKnown RBP2.84□□□□□ -1.95
PMS1-209ENST00000424059 IQCKQ8N0W5 287 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 C17orf53Q8N3J3 647 aaPredicted RBP2.84□□□□□ -1.95
PMS1-209ENST00000424059 MINDY1Q8N5J2 469 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 ALLCQ8N6M5 410 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 TSPYL6Q8N831 410 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 RTL3Q8N8U3 475 aaKnown RBP2.84□□□□□ -1.95
PMS1-209ENST00000424059 MINDY2Q8NBR6 621 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 BBS1Q8NFJ9 593 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 OR6B3Q8NGW1 331 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 BBS10Q8TAM1 723 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 MCOLN3Q8TDD5 553 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 DNAJA4Q8WW22 397 aaPredicted RBP2.84□□□□□ -1.95
PMS1-209ENST00000424059 HTR3CQ8WXA8 447 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 JADE3Q92613 823 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 GTF3AQ92664 365 aaKnown RBP2.84□□□□□ -1.95
PMS1-209ENST00000424059 ZNF707Q96C28 371 aaPredicted RBP2.84□□□□□ -1.95
PMS1-209ENST00000424059 IQCDQ96DY2 449 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 ALG14Q96F25 216 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 TMEM41AQ96HV5 264 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 DNAJC1Q96KC8 554 aaKnown RBP2.84□□□□□ -1.95
PMS1-209ENST00000424059 TRNT1Q96Q11 434 aaKnown RBP2.84□□□□□ -1.95
PMS1-209ENST00000424059 P2RX7Q99572 595 aaKnown RBP2.84□□□□□ -1.95
PMS1-209ENST00000424059 VKORC1Q9BQB6 163 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 TMEM79Q9BSE2 394 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 THUMPD3Q9BV44 507 aaKnown RBP2.84□□□□□ -1.95
PMS1-209ENST00000424059 HOXD1Q9GZZ0 328 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 USP44Q9H0E7 712 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 OPA3Q9H6K4 179 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 PCDH9Q9HC56 1237 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 SYTL2Q9HCH5 934 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 DIABLOQ9NR28 239 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 ARHGEF3Q9NR81 526 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 FAM120CQ9NX05 1096 aaKnown RBP2.84□□□□□ -1.95
PMS1-209ENST00000424059 ELOVL2Q9NXB9 296 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 SERGEFQ9UGK8 458 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 SERPINB13Q9UIV8 391 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 TSPYL4Q9UJ04 414 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 SNX7Q9UNH6 387 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 HPSEQ9Y251 543 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 EIF3LQ9Y262 564 aaKnown RBP2.84□□□□□ -1.95
PMS1-209ENST00000424059 PCDHA13Q9Y5I0 950 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 SNX14Q9Y5W7 946 aa2.84□□□□□ -1.95
PMS1-209ENST00000424059 RFX7Q2KHR2 1363 aa2.84□□□□□ -1.96
PMS1-209ENST00000424059 ARHGEF17Q96PE2 2063 aaPredicted RBP2.84□□□□□ -1.96
PMS1-209ENST00000424059 GSTTP1A0A1W2PQM5 241 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 BCLAF3A2AJT9 711 aaKnown RBP2.83□□□□□ -1.96
PMS1-209ENST00000424059 PRR23AA6NEV1 266 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 EFCAB10A6NFE3 127 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 FAM47DPA6NHR8 397 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 ZNF233A6NK53 670 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 TRPC5OSA6NMA1 111 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 VWC2LB2RUY7 222 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 H3BQF6 201 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 SOCS6O14544 535 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 ADAMTS3O15072 1205 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 PPM1DO15297 605 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 EIF3DO15371 548 aaKnown RBP eCLIP2.83□□□□□ -1.96
PMS1-209ENST00000424059 EIF3HO15372 352 aaKnown RBP eCLIP2.83□□□□□ -1.96
PMS1-209ENST00000424059 CLOCKO15516 846 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 MED7O43513 233 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 TBC1D4O60343 1298 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 ZNF821O75541 412 aaPredicted RBP2.83□□□□□ -1.96
PMS1-209ENST00000424059 RHBDL1O75783 438 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 CLPXO76031 633 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 DIRAS3O95661 229 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 FTCDO95954 541 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 IGHEP01854 428 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 CSF2P04141 144 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 IGKV2-30P06310 120 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 FABP1P07148 127 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 CRYGCP07315 174 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 CYC1P08574 325 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 KRT16P08779 473 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 EBLN1P0CF75 366 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 CSH1P0DML2 217 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 CSH2P0DML3 217 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 SLC2A3P11169 496 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 DARSP14868 501 aaKnown RBP2.83□□□□□ -1.96
PMS1-209ENST00000424059 NPR1P16066 1061 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 MALP21145 153 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 ADRA1DP25100 572 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 PCSK6P29122 969 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 EPHB2P29323 1055 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 CD6P30203 668 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 OXTRP30559 389 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 HOXA7P31268 230 aaPredicted RBP2.83□□□□□ -1.96
PMS1-209ENST00000424059 HMGCLP35914 325 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 GP5P40197 560 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 HCAR3P49019 387 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 ALDH9A1P49189 494 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 SERPINB9P50453 376 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 P2RY4P51582 365 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 RAP1GDS1P52306 607 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 OAZ1P54368 228 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 AP1S2P56377 157 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 PPATQ06203 517 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 CYP24A1Q07973 514 aa2.83□□□□□ -1.96
PMS1-209ENST00000424059 FCHO2Q0JRZ9 810 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms