RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 SLC22A18Q96BI1 424 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 PBKQ96KB5 322 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 PANX3Q96QZ0 392 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 MAP3K3Q99759 626 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 C17orf62Q9BQA9 187 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 GPR87Q9BY21 358 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 OR52A5Q9H2C5 316 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 FAM96AQ9H5X1 160 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 APMAPQ9HDC9 416 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 FGF21Q9NSA1 209 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 KCND1Q9NSA2 647 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 GEMIN8Q9NWZ8 242 aaKnown RBP8.42□□□□□ -1.06
MDC1-204ENST00000422266 SOHLH2Q9NX45 425 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 OR6C2Q9NZP2 312 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 FAM8A1Q9UBU6 413 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 LNPEPQ9UIQ6 1025 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 SERTAD3Q9UJW9 196 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 ASF1AQ9Y294 204 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 BTRCQ9Y297 605 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 VPS9D1Q9Y2B5 631 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 TCAF1Q9Y4C2 921 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 CFAP20Q9Y6A4 193 aaKnown RBP8.42□□□□□ -1.06
MDC1-204ENST00000422266 SDK2Q58EX2 2172 aa8.42□□□□□ -1.06
MDC1-204ENST00000422266 ITPR1Q14643 2758 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 IGHV5-51A0A0C4DH38 117 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 GOLGA6L10A0A0M3HER8 536 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 A0A0U1RQJ8 604 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 MAGEB16A2A368 324 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 GSAPA4D1B5 854 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 H3BMM5 538 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 ZSCAN12O43309 604 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 CEP104O60308 925 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 KIAA0754O94854 1291 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 GOT2P00505 430 aaKnown RBP8.41□□□□□ -1.06
MDC1-204ENST00000422266 APOA4P06727 396 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 FOXN2P32314 431 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 DLSTP36957 453 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 RPS15P62841 145 aaKnown RBP8.41□□□□□ -1.06
MDC1-204ENST00000422266 CDC20Q12834 499 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 LY6DQ14210 128 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 TBR1Q16650 682 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 RNF187Q5TA31 235 aaPredicted RBP8.41□□□□□ -1.06
MDC1-204ENST00000422266 MRNIPQ6NTE8 343 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 PCSK4Q6UW60 755 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 SDCCAG8Q86SQ7 713 aaPredicted RBP8.41□□□□□ -1.06
MDC1-204ENST00000422266 TMEM126BQ8IUX1 230 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 PIANPQ8IYJ0 282 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 GPR135Q8IZ08 494 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 SPDYE1Q8NFV5 336 aaPredicted RBP8.41□□□□□ -1.06
MDC1-204ENST00000422266 OR13J1Q8NGT2 312 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 GABPB2Q8TAK5 448 aaPredicted RBP8.41□□□□□ -1.06
MDC1-204ENST00000422266 MAGEC3Q8TD91 643 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 DENND1AQ8TEH3 1009 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 GRK7Q8WTQ7 553 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 APOBEC4Q8WW27 367 aaKnown RBP8.41□□□□□ -1.06
MDC1-204ENST00000422266 CPT1BQ92523 772 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 N4BP2L2Q92802 583 aaPredicted RBP8.41□□□□□ -1.06
MDC1-204ENST00000422266 RMDN2Q96LZ7 410 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 LRFN5Q96NI6 719 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 DPH2Q9BQC3 489 aaPredicted RBP8.41□□□□□ -1.06
MDC1-204ENST00000422266 CARD6Q9BX69 1037 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 RAB11FIP5Q9BXF6 653 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 SLC7A5P2Q9GIP4 190 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 SLC25A18Q9H1K4 315 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 MRM3Q9HC36 420 aaKnown RBP8.41□□□□□ -1.06
MDC1-204ENST00000422266 LHX9Q9NQ69 397 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 CATSPERZQ9NTU4 200 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 POMT2Q9UKY4 750 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 PPP2R2CQ9Y2T4 447 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 PCDHGA6Q9Y5G7 932 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 NBEAQ8NFP9 2946 aa8.41□□□□□ -1.06
MDC1-204ENST00000422266 IGSF10Q6WRI0 2623 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 FASNP49327 2511 aaKnown RBP8.4□□□□□ -1.06
MDC1-204ENST00000422266 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.4□□□□□ -1.06
MDC1-204ENST00000422266 LOC101059948A0A1B0GTJ6 334 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 PIPSLA2A3N6 862 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 CCDC162PA2VCL2 907 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 CCL22O00626 93 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 PRMT5O14744 637 aaPredicted RBP8.4□□□□□ -1.06
MDC1-204ENST00000422266 KIF1CO43896 1103 aaKnown RBP8.4□□□□□ -1.06
MDC1-204ENST00000422266 NDUFS3O75489 264 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 C1QL1O75973 258 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 FKBP9O95302 570 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 PRB1P04280 392 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 POLR2CP19387 275 aaPredicted RBP8.4□□□□□ -1.06
MDC1-204ENST00000422266 TPSB2P20231 275 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 PRDX3P30048 256 aaKnown RBP8.4□□□□□ -1.06
MDC1-204ENST00000422266 CA5AP35218 305 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 RPL22P35268 128 aaKnown RBP8.4□□□□□ -1.06
MDC1-204ENST00000422266 PREPP48147 710 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 CDKN1CP49918 316 aaPredicted RBP8.4□□□□□ -1.06
MDC1-204ENST00000422266 SH3BP2P78314 561 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 BOP1Q14137 746 aaKnown RBP8.4□□□□□ -1.06
MDC1-204ENST00000422266 TPSAB1Q15661 275 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 LINC00303Q3SY05 128 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 ZNF658BQ4V348 819 aaPredicted RBP8.4□□□□□ -1.06
MDC1-204ENST00000422266 CCDC38Q502W7 563 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 LRRC8BQ6P9F7 803 aa8.4□□□□□ -1.06
MDC1-204ENST00000422266 TAB3Q8N5C8 712 aaPredicted RBP8.4□□□□□ -1.06
MDC1-204ENST00000422266 CLDN19Q8N6F1 224 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms