RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ZNF292O60281 2723 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 EP300Q09472 2414 aaPredicted RBP13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 TCP11X1B4DZS4 312 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 H3BM21 787 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 FFAR2O15552 330 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 BGNP21810 368 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 HK3P52790 923 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 CLDN2P57739 230 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 BST1Q10588 318 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 BOP1Q14137 746 aaKnown RBP13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 SETDB1Q15047 1291 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 PCBP2Q15366 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 TERF2Q15554 542 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 CHI3L2Q15782 390 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 ZNF678Q5SXM1 525 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 CAPRIN2Q6IMN6 1127 aaKnown RBP13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 CFAP206Q8IYR0 622 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 SUMF1Q8NBK3 374 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 MAGEC3Q8TD91 643 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 STON2Q8WXE9 905 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 DLG3Q92796 817 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 SKA1Q96BD8 255 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 FOPNLQ96NB1 174 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 SIKE1Q9BRV8 207 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 GATA5Q9BWX5 397 aaPredicted RBP13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 TRIM54Q9BYV2 358 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 FGF22Q9HCT0 170 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 SLC23A2Q9UGH3 650 aa13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 PCYT1BQ9Y5K3 369 aaPredicted RBP13.94□□□□□ -0.18
SHMT1P1-201ENST00000419974 NPEPPSL1A6NEC2 478 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 CATP04040 527 aaKnown RBP13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 RPS17P08708 135 aaKnown RBP13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 CYP2A7P20853 494 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 DRD4P21917 467 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 THOP1P52888 689 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 SRP54P61011 504 aaKnown RBP13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 ABCE1P61221 599 aaKnown RBP13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 IRX4P78413 519 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 RPL6Q02878 288 aaKnown RBP13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 WDR45BQ5MNZ6 344 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 CES4AQ5XG92 561 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 TTC19Q6DKK2 380 aaPredicted RBP13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 RAB44Q7Z6P3 723 aaPredicted RBP13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 PDZD3Q86UT5 571 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 RGL4Q8IZJ4 473 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 SLC22A18ASQ8N1D0 253 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 FBXO39Q8N4B4 442 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 FAM160A2Q8N612 972 aaPredicted RBP13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 FRMD1Q8N878 549 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 PHC3Q8NDX5 983 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 OR13H1Q8NG92 308 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 MCOLN3Q8TDD5 553 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 NAT14Q8WUY8 206 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 PITPNM3Q9BZ71 974 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 NSRP1Q9H0G5 558 aaKnown RBP13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 ZNHIT2Q9UHR6 403 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 ADAMTS6Q9UKP5 1117 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 PDE10AQ9Y233 779 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 NUMA1Q14980 2115 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 OTOGLQ3ZCN5 2332 aa13.93□□□□□ -0.18
SHMT1P1-201ENST00000419974 WDR91A4D1P6 747 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 H0Y8X5 98 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 UBXN8O00124 270 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 MYO1CO00159 1063 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 RPN2P04844 631 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 ANXA5P08758 320 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 HIST1H2AGP0C0S8 130 aaPredicted RBP13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 NEFHP12036 1026 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 HIST1H2ADP20671 130 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 CD38P28907 300 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 SLC1A6P48664 564 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 PXNP49023 591 aaPredicted RBP13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 RPIAP49247 311 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 BLKP51451 505 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 NAGLUP54802 743 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 PCDH1Q08174 1060 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 RCN2Q14257 317 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 CRTC3Q6UUV7 619 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 ENPP7Q6UWV6 458 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 ABRAXAS1Q6UWZ7 409 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 FRMD7Q6ZUT3 714 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 UBE2R2Q712K3 238 aaPredicted RBP13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 PIGWQ7Z7B1 504 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 LRRC34Q8IZ02 419 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 SDR16C5Q8N3Y7 309 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 GPBAR1Q8TDU6 330 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 GAB3Q8WWW8 586 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 ATL1Q8WXF7 558 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 OR1E3Q8WZA6 343 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 RHBDF1Q96CC6 855 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 FBXL8Q96CD0 374 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 KLHDC7BQ96G42 594 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 ZC3H10Q96K80 434 aaKnown RBP13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 HIST1H2AHQ96KK5 128 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 CCDC138Q96M89 665 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 TMEM237Q96Q45 408 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 OR2M4Q96R27 311 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 CCT8L2Q96SF2 557 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 HIST1H2AJQ99878 128 aa13.92□□□□□ -0.18
SHMT1P1-201ENST00000419974 H2AFJQ9BTM1 129 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms