RNA–Protein interactions for RNA: ENST00000417962.5

SHISA5-204, Transcript of shisa family member 5, humanhuman

TSL 2

Gene SHISA5, Length 2,306 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-204ENST00000417962 KLQ9UEF7 1012 aa18.3■□□□□ 0.52
SHISA5-204ENST00000417962 RNF11Q9Y3C5 154 aa18.3■□□□□ 0.52
SHISA5-204ENST00000417962 NUP210Q8TEM1 1887 aaPredicted RBP18.29■□□□□ 0.52
SHISA5-204ENST00000417962 LOC730098B7Z3J9 87 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 RGS14O43566 566 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 RB1P06400 928 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 SRPRAP08240 638 aaKnown RBP18.29■□□□□ 0.52
SHISA5-204ENST00000417962 ENO2P09104 434 aaPredicted RBP18.29■□□□□ 0.52
SHISA5-204ENST00000417962 G6PDP11413 515 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 CASP2P42575 452 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 MED21Q13503 144 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 TCEAL5Q5H9L2 206 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 SERPINA13PQ6UXR4 307 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 UBE2Q1Q7Z7E8 422 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 ZFAND4Q86XD8 727 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 C7orf61Q8IZ16 206 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 ZNF366Q8N895 744 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 TMEM102Q8N9M5 508 aaPredicted RBP18.29■□□□□ 0.52
SHISA5-204ENST00000417962 BTBD9Q96Q07 612 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 SLC12A9Q9BXP2 914 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 PARVBQ9HBI1 364 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 PDP2Q9P2J9 529 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 POLR3HQ9Y535 204 aaPredicted RBP18.29■□□□□ 0.52
SHISA5-204ENST00000417962 WDR47O94967 919 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 ASLP04424 464 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 HIST1H2AGP0C0S8 130 aaPredicted RBP18.29■□□□□ 0.52
SHISA5-204ENST00000417962 MPC1LP0DKB6 136 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 EN2P19622 333 aaPredicted RBP18.29■□□□□ 0.52
SHISA5-204ENST00000417962 HIST1H2ADP20671 130 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 YBX1P67809 324 aaKnown RBP18.29■□□□□ 0.52
SHISA5-204ENST00000417962 TLR1Q15399 786 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 POM121L1PQ3SYA9 428 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 RFTN2Q52LD8 501 aaPredicted RBP18.29■□□□□ 0.52
SHISA5-204ENST00000417962 PLEKHS1Q5SXH7 462 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 CYP20A1Q6UW02 462 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 VRK3Q8IV63 474 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 DNAJB14Q8TBM8 379 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 OSCP1Q8WVF1 389 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 DUS3LQ96G46 650 aaKnown RBP18.29■□□□□ 0.52
SHISA5-204ENST00000417962 LRIG1Q96JA1 1093 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 HIST1H2AHQ96KK5 128 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 HIST1H2AJQ99878 128 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 H2AFJQ9BTM1 129 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 RIOK2Q9BVS4 552 aaKnown RBP18.29■□□□□ 0.52
SHISA5-204ENST00000417962 SLC32A1Q9H598 525 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 CCL27Q9Y4X3 112 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 PCDHA9Q9Y5H5 950 aa18.29■□□□□ 0.52
SHISA5-204ENST00000417962 C16orf96A6NNT2 1141 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 SLC28A1O00337 649 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 KPNA5O15131 536 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 ULK1O75385 1050 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 PIM1P11309 404 aaPredicted RBP18.28■□□□□ 0.52
SHISA5-204ENST00000417962 SLC2A4P14672 509 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 SLC7A1P30825 629 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 LBX1P52954 281 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 CDKL1Q00532 357 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 BNIP2Q12982 314 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 C12orf40Q86WS4 652 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 TRAM1L1Q8N609 369 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 WFIKKN2Q8TEU8 576 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 ASB11Q8WXH4 323 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 SMG7Q92540 1137 aaKnown RBP18.28■□□□□ 0.52
SHISA5-204ENST00000417962 ZUFSPQ96AP4 578 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 TMEM125Q96AQ2 219 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 SLCO4A1Q96BD0 722 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 MTIF3Q9H2K0 278 aaKnown RBP18.28■□□□□ 0.52
SHISA5-204ENST00000417962 RAD18Q9NS91 495 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 DKK3Q9UBP4 350 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 DYTNA2CJ06 578 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 PABPN1LA6NDY0 278 aaKnown RBP18.28■□□□□ 0.52
SHISA5-204ENST00000417962 ADH1CP00326 375 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 POU2F2P09086 479 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 ATP6V1B2P21281 511 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 GGT5P36269 586 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 GRIA3P42263 894 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 VASPP50552 380 aaPredicted RBP18.28■□□□□ 0.52
SHISA5-204ENST00000417962 ST8SIA6P61647 398 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 RPL38P63173 70 aaKnown RBP18.28■□□□□ 0.52
SHISA5-204ENST00000417962 SPATS1Q496A3 300 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 HENMT1Q5T8I9 393 aaKnown RBP18.28■□□□□ 0.52
SHISA5-204ENST00000417962 TTC23LQ6PF05 361 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 RNF165Q6ZSG1 346 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 DPPA4Q7L190 304 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 TICAM1Q8IUC6 712 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 TCAIMQ8N3R3 496 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 OR2T34Q8NGX1 318 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 OR2T3Q8NH03 318 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 ELMO1Q92556 727 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 RSPRY1Q96DX4 576 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 ZSCAN5AQ9BUG6 496 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 TRIM8Q9BZR9 551 aa18.28■□□□□ 0.52
SHISA5-204ENST00000417962 FARSBQ9NSD9 589 aaKnown RBP18.28■□□□□ 0.52
SHISA5-204ENST00000417962 ZNF490Q9ULM2 529 aaPredicted RBP18.28■□□□□ 0.52
SHISA5-204ENST00000417962 TXNDC9O14530 226 aa18.27■□□□□ 0.52
SHISA5-204ENST00000417962 RNASEH1O60930 286 aaKnown RBP18.27■□□□□ 0.52
SHISA5-204ENST00000417962 CLDN9O95484 217 aa18.27■□□□□ 0.52
SHISA5-204ENST00000417962 LYNP07948 512 aa18.27■□□□□ 0.52
SHISA5-204ENST00000417962 VIPR2P41587 438 aa18.27■□□□□ 0.52
SHISA5-204ENST00000417962 FOLH1Q04609 750 aa18.27■□□□□ 0.52
SHISA5-204ENST00000417962 C12orf76Q8N812 135 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms