RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 COQ6Q9Y2Z9 468 aa16.44■□□□□ 0.22
SSBP3-205ENST00000417664 TIMM22Q9Y584 194 aa16.44■□□□□ 0.22
SSBP3-205ENST00000417664 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.44■□□□□ 0.22
SSBP3-205ENST00000417664 C17orf113A0A1B0GUU1 675 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 MEI4A8MW99 385 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 K7EQS6 105 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 LIN7AO14910 233 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-205ENST00000417664 CHUKO15111 745 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 WDR47O94967 919 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 HGFP14210 728 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 DRD3P35462 400 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 NUDT2P50583 147 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 CTSCP53634 463 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 GTF2H3Q13889 308 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 SDE2Q6IQ49 451 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 PGM2L1Q6PCE3 622 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 TMEM220Q6QAJ8 160 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 VRK3Q8IV63 474 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 DEFB107AQ8IZN7 70 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 OR4F6Q8NGB9 312 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 TSPEARQ8WU66 669 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 DCLRE1BQ9H816 532 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 RNPEPL1Q9HAU8 725 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 FBRSL1Q9HCM7 1045 aaKnown RBP16.43■□□□□ 0.22
SSBP3-205ENST00000417664 TRPS1Q9UHF7 1281 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 MTCH2Q9Y6C9 303 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 CKAP5Q14008 2032 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 TMEM265A0A087WTH1 108 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 AIM2O14862 343 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 INPP4BO15327 924 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 PSIP1O75475 530 aaKnown RBP16.43■□□□□ 0.22
SSBP3-205ENST00000417664 CAPN1P07384 714 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 SNRPB2P08579 225 aaKnown RBP16.43■□□□□ 0.22
SSBP3-205ENST00000417664 ALDOCP09972 364 aaKnown RBP16.43■□□□□ 0.22
SSBP3-205ENST00000417664 MAP4P27816 1152 aaKnown RBP16.43■□□□□ 0.22
SSBP3-205ENST00000417664 HMOX2P30519 316 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 ARL1P40616 181 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-205ENST00000417664 ART3Q13508 389 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 SMU1Q2TAY7 513 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 C18orf21Q32NC0 220 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-205ENST00000417664 AGKQ53H12 422 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 ZNF776Q68DI1 518 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-205ENST00000417664 ADAMTSL4Q6UY14 1074 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 SLC22A15Q8IZD6 547 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 DSELQ8IZU8 1212 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 PGAM4Q8N0Y7 254 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 MIER2Q8N344 545 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 ATL1Q8WXF7 558 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 FBXL8Q96CD0 374 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 FOPNLQ96NB1 174 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 SLC29A3Q9BZD2 475 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 SDR39U1Q9NRG7 319 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-205ENST00000417664 SLC7A8Q9UHI5 535 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 BTRCQ9Y297 605 aa16.43■□□□□ 0.22
SSBP3-205ENST00000417664 LRRK1Q38SD2 2015 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 BBIP1A8MTZ0 92 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 PLK4O00444 970 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 MID1O15344 667 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 CATP04040 527 aaKnown RBP16.42■□□□□ 0.22
SSBP3-205ENST00000417664 GPX3P22352 226 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 TEAD1P28347 426 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 NTSR1P30989 418 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 ERVK-8P63133 956 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 TBL3Q12788 808 aaKnown RBP16.42■□□□□ 0.22
SSBP3-205ENST00000417664 STARD3Q14849 445 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 KIF19Q2TAC6 998 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 AGBL4Q5VU57 503 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 TRMT11Q7Z4G4 463 aaKnown RBP16.42■□□□□ 0.22
SSBP3-205ENST00000417664 ADGRG6Q86SQ4 1221 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 BEND7Q8N7W2 519 aaPredicted RBP16.42■□□□□ 0.22
SSBP3-205ENST00000417664 ENDOVQ8N8Q3 282 aaKnown RBP16.42■□□□□ 0.22
SSBP3-205ENST00000417664 OR2T3Q8NH03 318 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 RCN3Q96D15 328 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 HIC2Q96JB3 615 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 GABRG3Q99928 467 aa16.42■□□□□ 0.22
SSBP3-205ENST00000417664 PEX11AO75192 247 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 CTHP32929 405 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 SLC6A12P48065 614 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 SOX9P48436 509 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 KPNB1Q14974 876 aaKnown RBP16.41■□□□□ 0.22
SSBP3-205ENST00000417664 RPS6KA2Q15349 733 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 GGTA1PQ4G0N0 100 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 ZNF658BQ4V348 819 aaPredicted RBP16.41■□□□□ 0.22
SSBP3-205ENST00000417664 ATP6AP1LQ52LC2 224 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 ZNF648Q5T619 568 aaPredicted RBP16.41■□□□□ 0.22
SSBP3-205ENST00000417664 HACD2Q6Y1H2 254 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 RALGPS2Q86X27 583 aaPredicted RBP16.41■□□□□ 0.22
SSBP3-205ENST00000417664 FBXW8Q8N3Y1 598 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 AADATQ8N5Z0 425 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 FBXO15Q8NCQ5 510 aaPredicted RBP16.41■□□□□ 0.22
SSBP3-205ENST00000417664 HMGCLL1Q8TB92 370 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 COX14Q96I36 57 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 CCDC138Q96M89 665 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 C8orf33Q9H7E9 229 aaPredicted RBP16.41■□□□□ 0.22
SSBP3-205ENST00000417664 CCDC167Q9P0B6 97 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 CD207Q9UJ71 328 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 PTGDR2Q9Y5Y4 395 aa16.41■□□□□ 0.22
SSBP3-205ENST00000417664 LILRB5O75023 590 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 ENTPD5O75356 428 aa16.4■□□□□ 0.22
SSBP3-205ENST00000417664 CLDN9O95484 217 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms