RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ZBTB14O43829 449 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 PCDHGA12O60330 932 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 TCEA3O75764 348 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 C1QAP02745 245 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 LTA4HP09960 611 aaKnown RBP8.28□□□□□ -1.08
TRIM48-201ENST00000417545 ZNF37AP17032 561 aaPredicted RBP8.28□□□□□ -1.08
TRIM48-201ENST00000417545 CD9P21926 228 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 NDUFS1P28331 727 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 PDHA2P29803 388 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 DUSP3P51452 185 aaPredicted RBP8.28□□□□□ -1.08
TRIM48-201ENST00000417545 SLC14A1Q13336 389 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 NR0B2Q15466 257 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 TSNAXIP1Q2TAA8 658 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 HSP90B2PQ58FF3 399 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 ACSBG2Q5FVE4 666 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 UNC5DQ6UXZ4 953 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 NEK10Q6ZWH5 1172 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 UBE2R2Q712K3 238 aaPredicted RBP8.28□□□□□ -1.08
TRIM48-201ENST00000417545 ASCL5Q7RTU5 278 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 PIWIL4Q7Z3Z4 852 aaKnown RBP8.28□□□□□ -1.08
TRIM48-201ENST00000417545 NRROSQ86YC3 692 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 CEP97Q8IW35 865 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 SRRM1Q8IYB3 904 aaKnown RBP8.28□□□□□ -1.08
TRIM48-201ENST00000417545 SLC22A15Q8IZD6 547 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 LILRA3Q8N6C8 439 aaPredicted RBP8.28□□□□□ -1.08
TRIM48-201ENST00000417545 ARL10Q8N8L6 244 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 CCDC63Q8NA47 563 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 OR4C6Q8NH72 309 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 RHBDD1Q8TEB9 315 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 SAP25Q8TEE9 199 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 EEF1AKMT1Q8WVE0 214 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 TFGQ92734 400 aaPredicted RBP8.28□□□□□ -1.08
TRIM48-201ENST00000417545 EXT2Q93063 718 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 SH3KBP1Q96B97 665 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 EGFL8Q99944 293 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 HGH1Q9BTY7 390 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 DHRS4Q9BTZ2 278 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 NMRAL1Q9HBL8 299 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 PARD6AQ9NPB6 346 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 DNAAF2Q9NVR5 837 aaKnown RBP8.28□□□□□ -1.08
TRIM48-201ENST00000417545 GALPQ9UBC7 116 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 FTSJ1Q9UET6 329 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 RAPGEFL1Q9UHV5 662 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 PCDHGB2Q9Y5G2 931 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.27□□□□□ -1.09
TRIM48-201ENST00000417545 NPEPPSL1A6NEC2 478 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 OR52A4PA6NMU1 304 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 C4orf47A7E2U8 309 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 COPEO14579 308 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 GLRA3O75311 464 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 GPC4O75487 556 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 C2P06681 752 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 C8GP07360 202 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 MTHFD1P11586 935 aaKnown RBP8.27□□□□□ -1.09
TRIM48-201ENST00000417545 GCAP28676 217 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 CCNFP41002 786 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 BDKRB1P46663 353 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 CCT5P48643 541 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 MAZP56270 477 aaKnown RBP8.27□□□□□ -1.09
TRIM48-201ENST00000417545 ATP6V0D1P61421 351 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 HHEXQ03014 270 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 SP140Q13342 867 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 TSTA3Q13630 321 aaPredicted RBP8.27□□□□□ -1.09
TRIM48-201ENST00000417545 RASA2Q15283 850 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 SHBQ15464 509 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 RPE65Q16518 533 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 C14orf28Q4W4Y0 310 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 ARMC6Q6NXE6 501 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 DUS1LQ6P1R4 473 aaKnown RBP8.27□□□□□ -1.09
TRIM48-201ENST00000417545 ADAMTSL2Q86TH1 951 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 NAXDQ8IW45 347 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 DCUN1D3Q8IWE4 304 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 KIAA2013Q8IYS2 634 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 KYQ8NBH2 561 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 ACVR1CQ8NER5 493 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 OR6C4Q8NGE1 309 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 GIMAP7Q8NHV1 300 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 MCOLN3Q8TDD5 553 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 ACMSDQ8TDX5 336 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 SLC37A2Q8TED4 501 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 KCTD4Q8WVF5 259 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 AHCYL2Q96HN2 611 aaKnown RBP8.27□□□□□ -1.09
TRIM48-201ENST00000417545 PKNOX2Q96KN3 472 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 CNDP2Q96KP4 475 aaKnown RBP8.27□□□□□ -1.09
TRIM48-201ENST00000417545 RMDN2Q96LZ7 410 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 PHOX2BQ99453 314 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 SLC38A3Q99624 504 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 SLC30A3Q99726 388 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 TMEM109Q9BVC6 243 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.27□□□□□ -1.09
TRIM48-201ENST00000417545 UNKQ9C0B0 810 aaKnown RBP8.27□□□□□ -1.09
TRIM48-201ENST00000417545 OR52A5Q9H2C5 316 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 SLC32A1Q9H598 525 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 MVB12BQ9H7P6 319 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 CAAP1Q9H8G2 361 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 VIPAS39Q9H9C1 493 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 PRM3Q9NNZ6 103 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 POT1Q9NUX5 634 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 SENP1Q9P0U3 644 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms