RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 KCNMB2Q9Y691 235 aa24.64■■□□□ 1.54
VEGFA-208ENST00000417285 QSOX1O00391 747 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 TIAF1O95411 115 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 NTRK1P04629 796 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 CCDC175P0C221 793 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 LMAN1P49257 510 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 KPNA2P52292 529 aaKnown RBP24.63■■□□□ 1.53
VEGFA-208ENST00000417285 CDH17Q12864 832 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 ZNF658BQ4V348 819 aaPredicted RBP24.63■■□□□ 1.53
VEGFA-208ENST00000417285 CERS6Q6ZMG9 384 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 PTRH1Q86Y79 214 aaKnown RBP24.63■■□□□ 1.53
VEGFA-208ENST00000417285 CT55Q8WUE5 264 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 C1orf54Q8WWF1 131 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 RNF31Q96EP0 1072 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 LATS2Q9NRM7 1088 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 ANAPC2Q9UJX6 822 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 POMT2Q9UKY4 750 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 FLNCQ14315 2725 aa24.63■■□□□ 1.53
VEGFA-208ENST00000417285 E7EVH7 732 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 PYCARD-AS1I3L0S3 204 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 CPNE3O75131 537 aaKnown RBP24.62■■□□□ 1.53
VEGFA-208ENST00000417285 CDH3P22223 829 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 NSG1P42857 185 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 ATP1A1-AS1Q5TC04 95 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 ZNF662Q6ZS27 426 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 PIANPQ8IYJ0 282 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 CLDN19Q8N6F1 224 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 OR52K1Q8NGK4 314 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 TWSG1Q9GZX9 223 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 FANCEQ9HB96 536 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 ETNK1Q9HBU6 452 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 SOHLH2Q9NX45 425 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 SMARCAL1Q9NZC9 954 aa24.62■■□□□ 1.53
VEGFA-208ENST00000417285 LIN7AO14910 233 aaPredicted RBP24.61■■□□□ 1.53
VEGFA-208ENST00000417285 SCRG1O75711 98 aa24.61■■□□□ 1.53
VEGFA-208ENST00000417285 RPS15P62841 145 aaKnown RBP24.61■■□□□ 1.53
VEGFA-208ENST00000417285 ITIH4Q14624 930 aa24.61■■□□□ 1.53
VEGFA-208ENST00000417285 DBN1Q16643 649 aa24.61■■□□□ 1.53
VEGFA-208ENST00000417285 LYPLAL1Q5VWZ2 237 aa24.61■■□□□ 1.53
VEGFA-208ENST00000417285 PPP1R21Q6ZMI0 780 aa24.61■■□□□ 1.53
VEGFA-208ENST00000417285 TMEM126BQ8IUX1 230 aa24.61■■□□□ 1.53
VEGFA-208ENST00000417285 CCDC89Q8N998 374 aa24.61■■□□□ 1.53
VEGFA-208ENST00000417285 TFGQ92734 400 aaPredicted RBP24.61■■□□□ 1.53
VEGFA-208ENST00000417285 ZNF501Q96CX3 271 aaPredicted RBP24.61■■□□□ 1.53
VEGFA-208ENST00000417285 TTC1Q99614 292 aa24.61■■□□□ 1.53
VEGFA-208ENST00000417285 LZTFL1Q9NQ48 299 aa24.61■■□□□ 1.53
VEGFA-208ENST00000417285 ZNF71Q9NQZ8 489 aaPredicted RBP24.61■■□□□ 1.53
VEGFA-208ENST00000417285 CDC14CA4D256 554 aa24.6■■□□□ 1.53
VEGFA-208ENST00000417285 SLC9B1P1A6NJY1 282 aa24.6■■□□□ 1.53
VEGFA-208ENST00000417285 SUN1O94901 812 aa24.6■■□□□ 1.53
VEGFA-208ENST00000417285 KLK3P07288 261 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-208ENST00000417285 MSL3P1P0C860 447 aa24.6■■□□□ 1.53
VEGFA-208ENST00000417285 MSNP26038 577 aaKnown RBP24.6■■□□□ 1.53
VEGFA-208ENST00000417285 PTPN4P29074 926 aa24.6■■□□□ 1.53
VEGFA-208ENST00000417285 PDHA2P29803 388 aa24.6■■□□□ 1.53
VEGFA-208ENST00000417285 PRDX3P30048 256 aaKnown RBP24.6■■□□□ 1.53
VEGFA-208ENST00000417285 ARCN1P48444 511 aaKnown RBP24.6■■□□□ 1.53
VEGFA-208ENST00000417285 PLOD1Q02809 727 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-208ENST00000417285 SNX1Q13596 522 aa24.6■■□□□ 1.53
VEGFA-208ENST00000417285 BOP1Q14137 746 aaKnown RBP24.6■■□□□ 1.53
VEGFA-208ENST00000417285 GPR19Q15760 415 aa24.6■■□□□ 1.53
VEGFA-208ENST00000417285 PHC3Q8NDX5 983 aa24.6■■□□□ 1.53
VEGFA-208ENST00000417285 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.6■■□□□ 1.537e-6■■■■■ 27.5
VEGFA-208ENST00000417285 LRFN5Q96NI6 719 aa24.6■■□□□ 1.53
VEGFA-208ENST00000417285 TRIM4Q9C037 500 aa24.6■■□□□ 1.53
VEGFA-208ENST00000417285 PAK5Q9P286 719 aa24.6■■□□□ 1.53
VEGFA-208ENST00000417285 HEATR9A2RTY3 570 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 GSAPA4D1B5 854 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 F8W8V4 182 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 MKRN2OSH3BPM6 223 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 NRDCO43847 1150 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 FTH1P02794 183 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 PRSS56P0CW18 603 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 CASRP41180 1078 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 TLE1Q04724 770 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 LACTB2Q53H82 288 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-208ENST00000417285 PACS1Q6VY07 963 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 AMIGO1Q86WK6 493 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 LRRC8AQ8IWT6 810 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 OR52E1Q8NGJ3 308 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 ACTL8Q9H568 366 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 RAB6BQ9NRW1 208 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 RIMKLBQ9ULI2 386 aa24.59■■□□□ 1.53
VEGFA-208ENST00000417285 FARSAQ9Y285 508 aaKnown RBP24.59■■□□□ 1.53
VEGFA-208ENST00000417285 CCDC78A2IDD5 438 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 C2orf74A8MZ97 194 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 BTN3A3O00478 584 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 FURINP09958 794 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 PREPP48147 710 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 SEMA5AQ13591 1074 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 CCNG2Q16589 344 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 CCDC38Q502W7 563 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 TCTN3Q6NUS6 607 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 FAM199XQ6PEV8 388 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-208ENST00000417285 ZNF517Q6ZMY9 492 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-208ENST00000417285 NLRP9Q7RTR0 991 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 SYVN1Q86TM6 617 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 MAIP1Q8WWC4 291 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 THAP4Q8WY91 577 aa24.58■■□□□ 1.53
VEGFA-208ENST00000417285 CPT1BQ92523 772 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms