RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 CRTAC1Q9NQ79 661 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 PMM2O15305 246 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 BANF1O75531 89 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 PAPSS2O95340 614 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 CBSLP0DN79 551 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 TSPAN8P19075 237 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 GNAZP19086 355 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 CBSP35520 551 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 PIK3CBP42338 1070 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 EIF2B2P49770 351 aaKnown RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 SNAPC1Q16533 368 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 ZIK1Q3SY52 487 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 MFSD5Q6N075 450 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 BRAT1Q6PJG6 821 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 FAM129CQ86XR2 697 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 HID1Q8IV36 788 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 SH3RF2Q8TEC5 729 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 ZNF483Q8TF39 744 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 FAR1Q8WVX9 515 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 KBTBD7Q8WVZ9 684 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 ACOT12Q8WYK0 555 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 TSSK3Q96PN8 268 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 TRNT1Q96Q11 434 aaKnown RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 ZSCAN5AQ9BUG6 496 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 MCOLN1Q9GZU1 580 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 WDR26Q9H7D7 661 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 DZANK1Q9NVP4 752 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 DNAJB4Q9UDY4 337 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 MRPS7Q9Y2R9 242 aaKnown RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 COL22A1Q8NFW1 1626 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 WASHC1A8K0Z3 465 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 WASH3PC4AMC7 463 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 WNT9AO14904 365 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 TRIM3O75382 744 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 ITGBL1O95965 494 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 GPIP06744 558 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 ALOX5P09917 674 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 ADH5P11766 374 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 ZNF823P16415 610 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 CCR8P51685 355 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 RASGEF1BQ0VAM2 473 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 CHIT1Q13231 466 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.33□□□□□ -1.087e-7■■□□□ 12.2
CTNND1-206ENST00000415361 GLYATQ6IB77 296 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 KIAA0930Q6ICG6 404 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 DRICH1Q6PGQ1 229 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 WASH2PQ6VEQ5 465 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 GRASPQ7Z6J2 395 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 CCDC36Q8IYA8 594 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 VANGL1Q8TAA9 524 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 FCRL4Q96PJ5 515 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 NKX2-4Q9H2Z4 354 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 MCCC2Q9HCC0 563 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 NEUROD4Q9HD90 331 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 SDHAF3Q9NRP4 125 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 FCF1Q9Y324 198 aaKnown RBP8.33□□□□□ -1.08
CTNND1-206ENST00000415361 MYH1P12882 1939 aa8.33□□□□□ -1.08
CTNND1-206ENST00000415361 CASKO14936 926 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 INPPL1O15357 1258 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 LRCH4O75427 683 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 CCNB2O95067 398 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 LCA5LO95447 670 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 VNN1O95497 513 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 IGFBP5P24593 272 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 ASPAP45381 313 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 RPS6KA3P51812 740 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 MED22Q15528 200 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 DLG2Q15700 870 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 GKN2Q86XP6 184 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 ZNF280BQ86YH2 543 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 SPATA6LQ8N4H0 392 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 TRPV1Q8NER1 839 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 SNX33Q8WV41 574 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 GPATCH1Q9BRR8 931 aaKnown RBP8.32□□□□□ -1.08
CTNND1-206ENST00000415361 TBC1D10AQ9BXI6 508 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 GSDMCQ9BYG8 508 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 PLGRKTQ9HBL7 147 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 CNTN3Q9P232 1028 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 UPB1Q9UBR1 384 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 SNX10Q9Y5X0 201 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 MYH3P11055 1940 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 ILVBLA1L0T0 632 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 OR2AG2A6NM03 316 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 TEX46H3BTG2 121 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 PITPNM1O00562 1244 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 PLIN3O60664 434 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 TBX18O95935 607 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 RENP00797 406 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 RB1P06400 928 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 CCR10P46092 362 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 HCAR3P49019 387 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 CLCN7P51798 805 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 HADHBP55084 474 aaKnown RBP8.32□□□□□ -1.08
CTNND1-206ENST00000415361 JAM2P57087 298 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 ECT2LQ008S8 904 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 WDR45BQ5MNZ6 344 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 ADGRD1Q6QNK2 874 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 GPALPP1Q8IXQ4 340 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 COX18Q8N8Q8 333 aa8.32□□□□□ -1.08
CTNND1-206ENST00000415361 C12orf66Q96MD2 445 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms