RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 PITPNM3Q9BZ71 974 aa15.22■□□□□ 0.03
CPNE1-208ENST00000414711 KLHL25Q9H0H3 589 aa15.22■□□□□ 0.03
CPNE1-208ENST00000414711 CBX8Q9HC52 389 aa15.22■□□□□ 0.03
CPNE1-208ENST00000414711 PCDH9Q9HC56 1237 aa15.22■□□□□ 0.03
CPNE1-208ENST00000414711 CWC15Q9P013 229 aaKnown RBP15.22■□□□□ 0.03
CPNE1-208ENST00000414711 DHCR7Q9UBM7 475 aaKnown RBP15.22■□□□□ 0.03
CPNE1-208ENST00000414711 HS3ST3B1Q9Y662 390 aa15.22■□□□□ 0.03
CPNE1-208ENST00000414711 GOLGA6L19H0YKK7 550 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 KCNJ13O60928 360 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 UNGP13051 313 aaPredicted RBP15.21■□□□□ 0.03
CPNE1-208ENST00000414711 HCAR3P49019 387 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 OGDHQ02218 1023 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 QPCTQ16769 361 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 KLHDC7AQ5VTJ3 777 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 TMCO3Q6UWJ1 677 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 PHF13Q86YI8 300 aaPredicted RBP15.21■□□□□ 0.03
CPNE1-208ENST00000414711 TEX26Q8N6G2 289 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 LRRN4CLQ8ND94 238 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 N4BP2L2Q92802 583 aaPredicted RBP15.21■□□□□ 0.03
CPNE1-208ENST00000414711 TXLNGQ9NUQ3 528 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 PLA2G3Q9NZ20 509 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 NFKBIL1Q9UBC1 381 aaPredicted RBP15.21■□□□□ 0.03
CPNE1-208ENST00000414711 PCSK1NQ9UHG2 260 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 TTLL3Q9Y4R7 772 aa15.21■□□□□ 0.03
CPNE1-208ENST00000414711 C17orf113A0A1B0GUU1 675 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 FOXO6A8MYZ6 492 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 ZSCAN9O15535 394 aaPredicted RBP15.2■□□□□ 0.02
CPNE1-208ENST00000414711 PMPCBO75439 489 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 SLC4A1P02730 911 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 PVRP15151 417 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 UCHL3P15374 230 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 MTIF2P46199 727 aaKnown RBP15.2■□□□□ 0.02
CPNE1-208ENST00000414711 NFE2L1Q14494 772 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 IQCB1Q15051 598 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 ALG1LQ6GMV1 187 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 Q6ZPB1 254 aaPredicted RBP15.2■□□□□ 0.02
CPNE1-208ENST00000414711 MON1BQ7L1V2 547 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 OR4E2Q8NGC2 313 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 C12orf66Q96MD2 445 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 ZWILCHQ9H900 591 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 ZFYVE1Q9HBF4 777 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 MRM3Q9HC36 420 aaKnown RBP15.2■□□□□ 0.02
CPNE1-208ENST00000414711 ZNF835Q9Y2P0 537 aa15.2■□□□□ 0.02
CPNE1-208ENST00000414711 H3BMH7 237 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 PRAMEF2O60811 474 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 GFPT2O94808 682 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 UGT1A4P22310 534 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 PRDX3P30048 256 aaKnown RBP15.19■□□□□ 0.02
CPNE1-208ENST00000414711 MEOX1P50221 254 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 ZNF135P52742 658 aaPredicted RBP15.19■□□□□ 0.02
CPNE1-208ENST00000414711 ADAM8P78325 824 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 DSG2Q14126 1118 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 PCOLCEQ15113 449 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 DCUN1D2Q6PH85 259 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 OR11G2Q8NGC1 345 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 SDCCAG3Q96C92 435 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 ZNF653Q96CK0 615 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 ARSGQ96EG1 525 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 INSM2Q96T92 566 aaPredicted RBP15.19■□□□□ 0.02
CPNE1-208ENST00000414711 PCDHB18PQ96TA0 734 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 STK33Q9BYT3 514 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.19■□□□□ 0.025e-12■■■■□ 21.5
CPNE1-208ENST00000414711 WWP1Q9H0M0 922 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 RAD18Q9NS91 495 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 SLC22A11Q9NSA0 550 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 ETNK2Q9NVF9 386 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 ATRQ13535 2644 aa15.19■□□□□ 0.02
CPNE1-208ENST00000414711 POP7O75817 140 aaKnown RBP15.18■□□□□ 0.02
CPNE1-208ENST00000414711 WISP2O76076 250 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 SLCO2B1O94956 709 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 F10P00742 488 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 CES1P23141 567 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 SOX11P35716 441 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 PMP22Q01453 160 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 TMEM115Q12893 351 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-208ENST00000414711 RBBP7Q16576 425 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 CLEC16AQ2KHT3 1053 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 DEFB110Q30KQ9 67 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 VWA3BQ502W6 1294 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 CYP4V2Q6ZWL3 525 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-208ENST00000414711 LUZP1Q86V48 1076 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 SPPL2CQ8IUH8 684 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 ZNF655Q8N720 491 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-208ENST00000414711 GDAP1Q8TB36 358 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 PHF10Q8WUB8 498 aaKnown RBP15.18■□□□□ 0.02
CPNE1-208ENST00000414711 NUDT8Q8WV74 236 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 HAS2Q92819 552 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 FKBP10Q96AY3 582 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 VPS50Q96JG6 964 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 TTC25Q96NG3 672 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 VPS35Q96QK1 796 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 SPRTNQ9H040 489 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-208ENST00000414711 DEF6Q9H4E7 631 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 WDR54Q9H977 334 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 NPDC1Q9NQX5 325 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-208ENST00000414711 FANCLQ9NW38 375 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 PTGFRNQ9P2B2 879 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 ST6GALNAC2Q9UJ37 374 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 TMPRSS11EQ9UL52 423 aa15.18■□□□□ 0.02
CPNE1-208ENST00000414711 ANKRD66B4E2M5 251 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms