RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 POLG2Q9UHN1 485 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 SLC24A2Q9UI40 661 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 PSAT1Q9Y617 370 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 RP1P56715 2156 aa16.07■□□□□ 0.16
LINC00398-201ENST00000414407 TMX2-CTNND1H3BSU7 103 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 EIF3FO00303 357 aaPredicted RBP16.06■□□□□ 0.16
LINC00398-201ENST00000414407 DUX1O43812 170 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 HYAL3O43820 417 aaPredicted RBP16.06■□□□□ 0.16
LINC00398-201ENST00000414407 RPN2P04844 631 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 F7P08709 466 aaPredicted RBP16.06■□□□□ 0.16
LINC00398-201ENST00000414407 CBSLP0DN79 551 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 JUPP14923 745 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 CBSP35520 551 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 CSE1LP55060 971 aaKnown RBP16.06■□□□□ 0.16
LINC00398-201ENST00000414407 FOXK2Q01167 660 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 FAM45BPQ6NSW5 357 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 WDR74Q6RFH5 385 aaPredicted RBP16.06■□□□□ 0.16
LINC00398-201ENST00000414407 NEK10Q6ZWH5 1172 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 ZC3HC1Q86WB0 502 aaKnown RBP16.06■□□□□ 0.16
LINC00398-201ENST00000414407 ZNF761Q86XN6 746 aaPredicted RBP16.06■□□□□ 0.16
LINC00398-201ENST00000414407 VRK3Q8IV63 474 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 OR5K2Q8NHB8 316 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 FAM45AQ8TCE6 357 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 FBF1Q8TES7 1133 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 INPP5DQ92835 1189 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 TMEM74Q96NL1 305 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 FERD3LQ96RJ6 166 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 CPNE1Q99829 537 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 TBC1D10AQ9BXI6 508 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 FUT8Q9BYC5 575 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 TRIT1Q9H3H1 467 aaKnown RBP16.06■□□□□ 0.16
LINC00398-201ENST00000414407 CDC42EP4Q9H3Q1 356 aaKnown RBP16.06■□□□□ 0.16
LINC00398-201ENST00000414407 RHOJQ9H4E5 214 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 TFB2MQ9H5Q4 396 aaKnown RBP16.06■□□□□ 0.16
LINC00398-201ENST00000414407 TXNDC16Q9P2K2 825 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 GALPQ9UBC7 116 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 ASF1AQ9Y294 204 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 VWA7Q9Y334 891 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 NEUROG3Q9Y4Z2 214 aa16.06■□□□□ 0.16
LINC00398-201ENST00000414407 PRAMEF33A0A0G2JMD5 474 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 CXorf49A8MYA2 514 aaPredicted RBP16.05■□□□□ 0.16
LINC00398-201ENST00000414407 KDM1AO60341 852 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 UBXN7O94888 489 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 ENO3P13929 434 aaPredicted RBP16.05■□□□□ 0.16
LINC00398-201ENST00000414407 GP5P40197 560 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 MAPK9P45984 424 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 TIAL1Q01085 375 aaKnown RBP eCLIP16.05■□□□□ 0.16
LINC00398-201ENST00000414407 ISXQ2M1V0 245 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 KBTBD12Q3ZCT8 623 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 AMZ1Q400G9 498 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 LRRC8EQ6NSJ5 796 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 DUS1LQ6P1R4 473 aaKnown RBP16.05■□□□□ 0.16
LINC00398-201ENST00000414407 KLHL35Q6PF15 583 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 SIDT2Q8NBJ9 832 aaKnown RBP16.05■□□□□ 0.16
LINC00398-201ENST00000414407 PHC3Q8NDX5 983 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 OR4D9Q8NGE8 314 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 CD200R1Q8TD46 325 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 GPR21Q99679 349 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 SCNM1Q9BWG6 230 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 RAB33BQ9H082 229 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 SYNDIG1Q9H7V2 258 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 PDP2Q9P2J9 529 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 EPHA6Q9UF33 1036 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 SPEGQ15772 3267 aa16.05■□□□□ 0.16
LINC00398-201ENST00000414407 MED19A0JLT2 244 aaPredicted RBP16.04■□□□□ 0.16
LINC00398-201ENST00000414407 CASC3O15234 703 aaKnown RBP16.04■□□□□ 0.16
LINC00398-201ENST00000414407 MATN4O95460 622 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 PROS1P07225 676 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 MPC1LP0DKB6 136 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 AMD1P17707 334 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 FDXRP22570 491 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 CCKBRP32239 447 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 ZFP36L1Q07352 338 aaKnown RBP16.04■□□□□ 0.16
LINC00398-201ENST00000414407 TARDBPQ13148 414 aaKnown RBP eCLIP16.04■□□□□ 0.16
LINC00398-201ENST00000414407 TRA2AQ13595 282 aaKnown RBP eCLIP16.04■□□□□ 0.16
LINC00398-201ENST00000414407 PLCL1Q15111 1095 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 MAP9Q49MG5 647 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 RBM20Q5T481 1227 aaKnown RBP16.04■□□□□ 0.16
LINC00398-201ENST00000414407 HECTD2Q5U5R9 776 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 NKAIN2Q5VXU1 208 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 TMEM71Q6P5X7 295 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 CCNI2Q6ZMN8 369 aaPredicted RBP16.04■□□□□ 0.16
LINC00398-201ENST00000414407 USP53Q70EK8 1073 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 TRMT10CQ7L0Y3 403 aaKnown RBP16.04■□□□□ 0.16
LINC00398-201ENST00000414407 SLITRK4Q8IW52 837 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 GPATCH11Q8N954 259 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 OR5AR1Q8NGP9 310 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 GIMAP7Q8NHV1 300 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 FAM136AQ96C01 138 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 FOPNLQ96NB1 174 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 CYTH2Q99418 400 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 NDNQ99608 321 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 SLC30A3Q99726 388 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 ACSS3Q9H6R3 686 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 ANKZF1Q9H8Y5 726 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 OGFRQ9NZT2 677 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 TRMT6Q9UJA5 497 aaKnown RBP16.04■□□□□ 0.16
LINC00398-201ENST00000414407 ANGPTL2Q9UKU9 493 aa16.04■□□□□ 0.16
LINC00398-201ENST00000414407 ATXN7L1Q9ULK2 861 aaPredicted RBP16.04■□□□□ 0.16
LINC00398-201ENST00000414407 MSRB2Q9Y3D2 182 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms