RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PLD3Q8IV08 490 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 AVL9Q8NBF6 648 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 TSPAN14Q8NG11 270 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 OR2AJ1Q8NGZ0 328 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 SNRNP27Q8WVK2 155 aaKnown RBP3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 DAZLQ92904 295 aaKnown RBP3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 ARSGQ96EG1 525 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 SGK494Q96LW2 274 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 DGAT2Q96PD7 388 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 MS4A10Q96PG2 267 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 SLF1Q9BQI6 1058 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 BTBD10Q9BSF8 475 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 APOL6Q9BWW8 343 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 DPAGT1Q9H3H5 408 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 UPF2Q9HAU5 1272 aaKnown RBP3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 SLC35C2Q9NQQ7 365 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 ZNF112Q9UJU3 913 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 ANAPC2Q9UJX6 822 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 FAF1Q9UNN5 650 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 MAGED1Q9Y5V3 778 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 FAM169AQ9Y6X4 670 aa3.55□□□□□ -1.84
HMGB1P11-201ENST00000413899 UGGT2Q9NYU1 1516 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 SOS1Q07889 1333 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 hCG_1809904A0A1W2PP81 198 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 A0A1W2PPE2 198 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 A0A1W2PR64 198 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 FEZF1A0PJY2 475 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 ANKUB1A6NFN9 424 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 TMEM221A6NGB7 291 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 FAM72CH0Y354 149 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 XRCC3O43542 346 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 TSPAN1O60635 241 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 TOMM70O94826 608 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 BCL10O95999 233 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 SP1P08047 785 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 ABCB1P08183 1280 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 DANCRP0C864 163 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 IGHV4-38-2P0DP08 117 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 CKMT2P17540 419 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 PLA2G7Q13093 441 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 WDR38Q5JTN6 314 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 FAM72AQ5TYM5 149 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 TMEM211Q6ICI0 200 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 SLC35E4Q6ICL7 350 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 FAM72DQ6L9T8 149 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 USP43Q70EL4 1123 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 DGLUCYQ7Z3D6 616 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 FAM72BQ86X60 149 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 CRYBG2Q8N1P7 616 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 FBXO39Q8N4B4 442 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 LSMEM1Q8N8F7 131 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 POMGNT2Q8NAT1 580 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 PPFIBP2Q8ND30 876 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 OR2T12Q8NG77 320 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 EXD1Q8NHP7 514 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 SPACA9Q96E40 222 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 PGLYRP2Q96PD5 576 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 KLHL4Q9C0H6 718 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 VN1R1Q9GZP7 353 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 TMX4Q9H1E5 349 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 WNT5BQ9H1J7 359 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 ACKR4Q9NPB9 350 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 EQTNQ9NQ60 294 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 IL17BQ9UHF5 180 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 TCF19Q9Y242 345 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 SPIN1Q9Y657 262 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 SHROOM2Q13796 1616 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 ADCY10Q96PN6 1610 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 ARHGEF11O15085 1522 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 AQRO60306 1485 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 GRIN2BQ13224 1484 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 IFT140Q96RY7 1462 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 FYCO1Q9BQS8 1478 aa3.54□□□□□ -1.84
HMGB1P11-201ENST00000413899 CROCC2H7BZ55 1655 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 GCC2Q8IWJ2 1684 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 HECW1Q76N89 1606 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 KRT86O43790 486 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 SYNCRIPO60506 623 aaKnown RBP3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 TSHBP01222 138 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 PRSS1P07477 247 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 INHBAP08476 426 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 OR2T7P0C7T2 308 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 SLC6A6P31641 620 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 GABRA5P31644 462 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 CDKN1AP38936 164 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 PSMC4P43686 418 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 RPS18P62269 152 aaKnown RBP3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 UBXN2AP68543 259 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 CALD1Q05682 793 aaKnown RBP3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 KRT81Q14533 505 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 IL11RAQ14626 422 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 SNAPC1Q16533 368 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 ZC2HC1CQ53FD0 456 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 RNASEH2BQ5TBB1 312 aaKnown RBP3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 FAM198BQ6UWH4 519 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 SLC26A9Q7LBE3 791 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 TMEM173Q86WV6 379 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 CEP57L1Q8IYX8 460 aa3.53□□□□□ -1.84
HMGB1P11-201ENST00000413899 CCDC89Q8N998 374 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms