RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 SETMARQ53H47 684 aaPredicted RBP16.83■□□□□ 0.28
PTPRC-206ENST00000413409 CTSL3PQ5NE16 218 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 ZNF678Q5SXM1 525 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 LYPLAL1Q5VWZ2 237 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 SDE2Q6IQ49 451 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 SPACA3Q8IXA5 215 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 CPSF7Q8N684 471 aaKnown RBP16.83■□□□□ 0.28
PTPRC-206ENST00000413409 RBM15BQ8NDT2 890 aaKnown RBP16.83■□□□□ 0.28
PTPRC-206ENST00000413409 ECHDC3Q96DC8 303 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 WBP1Q96G27 269 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 OR52B2Q96RD2 323 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 ERVK-6Q9BXR3 956 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 P2RY12Q9H244 342 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 CYP4F12Q9HCS2 524 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 TRMT6Q9UJA5 497 aaKnown RBP16.83■□□□□ 0.28
PTPRC-206ENST00000413409 APPL1Q9UKG1 709 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 PLA2G4CQ9UP65 541 aa16.83■□□□□ 0.28
PTPRC-206ENST00000413409 TMEM131Q92545 1883 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 SYCE1LA8MT33 242 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 PABPC1P11940 636 aaKnown RBP16.82■□□□□ 0.28
PTPRC-206ENST00000413409 CTPS1P17812 591 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 ITGALP20701 1170 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 KLF10Q13118 480 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 OR4D1Q15615 310 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 CDKN3Q16667 212 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 UGT3A1Q6NUS8 523 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 CUZD1Q86UP6 607 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 PLPP6Q8IY26 295 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 CBARPQ8N350 705 aaPredicted RBP16.82■□□□□ 0.28
PTPRC-206ENST00000413409 STAG3L4Q8TBR4 150 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 AGR3Q8TD06 166 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 ACTRT2Q8TDY3 377 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 FGF11Q92914 225 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 GPR21Q99679 349 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 SLC2A11Q9BYW1 496 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 CPEB1Q9BZB8 566 aaKnown RBP16.82■□□□□ 0.28
PTPRC-206ENST00000413409 NRSN2Q9GZP1 204 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 MKRN2Q9H000 416 aaKnown RBP16.82■□□□□ 0.28
PTPRC-206ENST00000413409 ZFYVE1Q9HBF4 777 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 SPHK2Q9NRA0 654 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 PPIL1Q9Y3C6 166 aa16.82■□□□□ 0.28
PTPRC-206ENST00000413409 TRBV5-4A0A0C4DH59 114 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 E9PBE3 544 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 H3BMM5 538 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 SDHDO14521 159 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 GAPDHSO14556 408 aaPredicted RBP16.81■□□□□ 0.28
PTPRC-206ENST00000413409 PRMT5O14744 637 aaPredicted RBP16.81■□□□□ 0.28
PTPRC-206ENST00000413409 KLHL41O60662 606 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 ALPIP09923 528 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 C6P13671 934 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 NCF2P19878 526 aaPredicted RBP16.81■□□□□ 0.28
PTPRC-206ENST00000413409 CPOXP36551 454 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 PGM1P36871 562 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 CPA2P48052 419 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 MYLK3Q32MK0 819 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 LSM12Q3MHD2 195 aaKnown RBP16.81■□□□□ 0.28
PTPRC-206ENST00000413409 PREPLQ4J6C6 727 aaPredicted RBP16.81■□□□□ 0.28
PTPRC-206ENST00000413409 UNC50Q53HI1 259 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 GRAMD4Q6IC98 578 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 PAQR3Q6TCH7 311 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 SNX20Q7Z614 316 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 KIAA0907Q7Z7F0 614 aaPredicted RBP16.81■□□□□ 0.28
PTPRC-206ENST00000413409 PTGR2Q8N8N7 351 aaPredicted RBP16.81■□□□□ 0.28
PTPRC-206ENST00000413409 OR6K2Q8NGY2 324 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 CD200R1Q8TD46 325 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 AGAP11Q8TF27 550 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 EID2BQ96D98 161 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 MCCC1Q96RQ3 725 aaPredicted RBP16.81■□□□□ 0.28
PTPRC-206ENST00000413409 TTC1Q99614 292 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 NUF2Q9BZD4 464 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 TNKS2Q9H2K2 1166 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 MEAF6Q9HAF1 191 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 BPIFA1Q9NP55 256 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 FLNCQ14315 2725 aa16.81■□□□□ 0.28
PTPRC-206ENST00000413409 C1orf232A0A0U1RR37 186 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 H0Y8X5 98 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 STX16-NPEPL1H3BU86 382 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 STX16O14662 325 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 PCDHGA12O60330 932 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 BRINP1O60477 761 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 PEX11AO75192 247 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 TM7SF2O76062 418 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 PRAMEF1O95521 474 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 MTHFD2P13995 350 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 SPAM1P38567 509 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 CTSOP43234 321 aaPredicted RBP16.8■□□□□ 0.28
PTPRC-206ENST00000413409 KCNC1P48547 511 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 CDKN1CP49918 316 aaPredicted RBP16.8■□□□□ 0.28
PTPRC-206ENST00000413409 VASPP50552 380 aaPredicted RBP16.8■□□□□ 0.28
PTPRC-206ENST00000413409 TPMTP51580 245 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 PDCD2Q16342 344 aaPredicted RBP16.8■□□□□ 0.28
PTPRC-206ENST00000413409 GPR33Q49SQ1 333 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 LAYNQ6UX15 382 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 NUDT18Q6ZVK8 323 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 USP45Q70EL2 814 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 RBFAQ8N0V3 343 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 ENDOVQ8N8Q3 282 aaKnown RBP16.8■□□□□ 0.28
PTPRC-206ENST00000413409 VOPP1Q96AW1 172 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 PHF21BQ96EK2 531 aa16.8■□□□□ 0.28
PTPRC-206ENST00000413409 MOCOSQ96EN8 888 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms