RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 AGXT2Q9BYV1 514 aa1.16□□□□□ -2.22
RNU2-55P-201ENST00000411146 TMEM39BQ9GZU3 492 aa1.16□□□□□ -2.22
RNU2-55P-201ENST00000411146 PAIP1Q9H074 479 aaKnown RBP1.16□□□□□ -2.22
RNU2-55P-201ENST00000411146 S1PR5Q9H228 398 aa1.16□□□□□ -2.22
RNU2-55P-201ENST00000411146 DENND2DQ9H6A0 471 aaPredicted RBP1.16□□□□□ -2.22
RNU2-55P-201ENST00000411146 PPCSQ9HAB8 311 aa1.16□□□□□ -2.22
RNU2-55P-201ENST00000411146 TRMT1Q9NXH9 659 aaKnown RBP1.16□□□□□ -2.22
RNU2-55P-201ENST00000411146 CWC15Q9P013 229 aaKnown RBP1.16□□□□□ -2.22
RNU2-55P-201ENST00000411146 FBXL17Q9UF56 701 aa1.16□□□□□ -2.22
RNU2-55P-201ENST00000411146 A0A087WUV0 522 aaPredicted RBP1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 FAM237BA0A1B0GVD1 139 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 ACOD1A6NK06 481 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 KPNA7A9QM74 516 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 SHISA9B4DS77 424 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 TO15178 435 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 PHF1O43189 567 aaPredicted RBP1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 NXPH2O95156 264 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 PIGNO95427 931 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 KRT6AP02538 564 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 KRT6BP04259 564 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 TRIM49P0CI25 452 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 TRIM49CP0CI26 452 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 PRKACGP22612 351 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 IL4RP24394 825 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 ETV5P41161 510 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 PIK3CAP42336 1068 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 PTGER3P43115 390 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 MAPK9P45984 424 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 KRT6CP48668 564 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 CLCN4P51793 760 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 PAX9P55771 341 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 EIF3BP55884 814 aaKnown RBP1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 GSDMDP57764 484 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 RPS18P62269 152 aaKnown RBP1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 CSNK2BP67870 215 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 OLR1P78380 273 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 TLE2Q04725 743 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 DLG2Q15700 870 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 SOWAHCQ53LP3 525 aaPredicted RBP1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 INTS11Q5TA45 600 aaKnown RBP1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 TPRG1Q6ZUI0 275 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 SLC47A2Q86VL8 602 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 TICAM1Q8IUC6 712 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 TMEM139Q8IV31 216 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 FAM114A1Q8IWE2 563 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 ABHD12Q8N2K0 398 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 CPSF7Q8N684 471 aaKnown RBP1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 TSPYL6Q8N831 410 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 OR13J1Q8NGT2 312 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 TBC1D16Q8TBP0 767 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 METTL6Q8TCB7 284 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 NOC3LQ8WTT2 800 aaKnown RBP1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 DYRK2Q92630 601 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 SAAL1Q96ER3 474 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 ELMOD3Q96FG2 381 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 FAM81BQ96LP2 452 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 LINC00167Q96N53 147 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 DDOQ99489 341 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 SEPT5Q99719 369 aaPredicted RBP1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 C16orf70Q9BSU1 422 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 ISCA1Q9BUE6 129 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 RPP25Q9BUL9 199 aaKnown RBP1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 CHST11Q9NPF2 352 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 SETD4Q9NVD3 440 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 OSER1Q9NX31 292 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 SAGE1Q9NXZ1 904 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 RHCGQ9UBD6 479 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 CLIP2Q9UDT6 1046 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 FBXW11Q9UKB1 542 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 ZNF510Q9Y2H8 683 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 STYXL1Q9Y6J8 313 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 UMODL1Q5DID0 1318 aa1.15□□□□□ -2.23
RNU2-55P-201ENST00000411146 TRIOBPQ9H2D6 2365 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 A0A1W2PRB8 838 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 A0A1W2PRG0 241 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 C15orf61A6NNL5 157 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 MAP2K7O14733 419 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 HOXC11O43248 304 aaPredicted RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 SLC25A12O75746 678 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 H1F0P07305 194 aaKnown RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 KLK2P20151 261 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 GPR143P51810 404 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 RARSP54136 660 aaKnown RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 GSCP56915 257 aaPredicted RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 CSTF3Q12996 717 aaKnown RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 TRPC3Q13507 836 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 FASTKD3Q14CZ7 662 aaKnown RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 MED22Q15528 200 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 NAB2Q15742 525 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 TAF12Q16514 161 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 C15orf32Q32M92 178 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 MOGAT2Q3SYC2 334 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 EIPR1Q53HC9 387 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 SPDYCQ5MJ68 293 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 GCNT6Q5T4J0 391 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 GRTP1Q5TC63 336 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 SLC25A47Q6Q0C1 308 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 TMEM207Q6UWW9 146 aa1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 TIPARPQ7Z3E1 657 aaKnown RBP1.14□□□□□ -2.23
RNU2-55P-201ENST00000411146 CEACAM19Q7Z692 300 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms