RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 MRPS22P82650 360 aaKnown RBP13.32□□□□□ -0.28
LIMS1-205ENST00000410093 MAP7Q14244 749 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 INPP5AQ14642 412 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 ATP13A5Q4VNC0 1218 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 ZNF805Q5CZA5 627 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 LDLRAP1Q5SW96 308 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
LIMS1-205ENST00000410093 LETMD1Q6P1Q0 360 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 CLDN19Q8N6F1 224 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 CDYL2Q8N8U2 506 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 FNDC5Q8NAU1 212 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 OR4F6Q8NGB9 312 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 FRS2Q8WU20 508 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 VPS35Q96QK1 796 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 ZBTB18Q99592 522 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 SMG9Q9H0W8 520 aaKnown RBP13.32□□□□□ -0.28
LIMS1-205ENST00000410093 SLC32A1Q9H598 525 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 SLC52A3Q9NQ40 469 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 ARMC1Q9NVT9 282 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 ACTR3BQ9P1U1 418 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 MAP10Q9P2G4 905 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 IL36AQ9UHA7 158 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 RIMS3Q9UJD0 308 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 ANKRD12Q6UB98 2062 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 MYOFQ9NZM1 2061 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 PRORSD1PA6NEY8 169 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 A6NHS1 94 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 NPIPB8E9PQR5 432 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 H0Y858 1186 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 TAPBPO15533 448 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 DENRO43583 198 aaKnown RBP13.31□□□□□ -0.28
LIMS1-205ENST00000410093 SMNDC1O75940 238 aaKnown RBP eCLIP13.31□□□□□ -0.28
LIMS1-205ENST00000410093 KRT6AP02538 564 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 KRT6BP04259 564 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 GSTM1P09488 218 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 UMPSP11172 480 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 CD1EP15812 388 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 HOXB6P17509 224 aaKnown RBP13.31□□□□□ -0.28
LIMS1-205ENST00000410093 LHCGRP22888 699 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 XPAP23025 273 aaPredicted RBP13.31□□□□□ -0.28
LIMS1-205ENST00000410093 KRT6CP48668 564 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 RPIAP49247 311 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 SLC7A2P52569 658 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 ST8SIA6P61647 398 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 GSTM4Q03013 218 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 TRAF3Q13114 568 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 LEXMQ3ZCV2 418 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 LCN8Q6JVE9 175 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 ERAP2Q6P179 960 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 IL27RAQ6UWB1 636 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 RNF111Q6ZNA4 994 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 Q6ZSR9 355 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 Q6ZVU0 165 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 DPPA4Q7L190 304 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 ZFAND4Q86XD8 727 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 KBTBD2Q8IY47 623 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 DDHD1Q8NEL9 900 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 OR52B6Q8NGF0 335 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 OR9I1Q8NGQ6 314 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 OR2T34Q8NGX1 318 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 OR2T3Q8NH03 318 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 ASZ1Q8WWH4 475 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 EPHX3Q9H6B9 360 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 SLCO3A1Q9UIG8 710 aa13.31□□□□□ -0.28
LIMS1-205ENST00000410093 MRPS23Q9Y3D9 190 aaKnown RBP13.31□□□□□ -0.28
LIMS1-205ENST00000410093 LSM1O15116 133 aaKnown RBP13.3□□□□□ -0.28
LIMS1-205ENST00000410093 UGDHO60701 494 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 ULK1O75385 1050 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 RFPL2O75678 378 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 CLDN9O95484 217 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 GPIP06744 558 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 FCGR1AP12314 374 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 CAPN3P20807 821 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 PEX2P28328 305 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 PRDX3P30048 256 aaKnown RBP13.3□□□□□ -0.28
LIMS1-205ENST00000410093 ARL1P40616 181 aaPredicted RBP13.3□□□□□ -0.28
LIMS1-205ENST00000410093 HSPA7P48741 367 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 DGKGP49619 791 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 EIF4HQ15056 248 aaKnown RBP13.3□□□□□ -0.28
LIMS1-205ENST00000410093 NR6A1Q15406 480 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 ZNF284Q2VY69 593 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 GRAMD1BQ3KR37 738 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 VPS26BQ4G0F5 336 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 RETREG3Q86VR2 466 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 PTRH1Q86Y79 214 aaKnown RBP13.3□□□□□ -0.28
LIMS1-205ENST00000410093 TICAM1Q8IUC6 712 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 EFCAB3Q8N7B9 438 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 MCOLN3Q8TDD5 553 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 OSCP1Q8WVF1 389 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 ATL1Q8WXF7 558 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 ASB11Q8WXH4 323 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 MRGPRX3Q96LB0 322 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 SPATA16Q9BXB7 569 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 CXorf56Q9H5V9 222 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 OBP2AQ9NY56 170 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 PCDHA9Q9Y5H5 950 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 XIRP2A4UGR9 3374 aa13.3□□□□□ -0.28
LIMS1-205ENST00000410093 SPTBN5Q9NRC6 3674 aaKnown RBP13.29□□□□□ -0.28
LIMS1-205ENST00000410093 A0A1B0GTL3 188 aa13.29□□□□□ -0.28
LIMS1-205ENST00000410093 H3BQ06 376 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms