RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 C9P02748 559 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 ITGA2BP08514 1039 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 PKMP14618 531 aaKnown RBP10.63□□□□□ -0.71
CHMP3-205ENST00000409810 HOXB3P14651 431 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-205ENST00000409810 CHRM3P20309 590 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 PDHA2P29803 388 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 CCR7P32248 378 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 PLTPP55058 493 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 CSE1LP55060 971 aaKnown RBP10.63□□□□□ -0.71
CHMP3-205ENST00000409810 ERVPABLB-1P60509 514 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 CTBP1Q13363 440 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 TTLL9Q3SXZ7 439 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 CTSL3PQ5NE16 218 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 SNAP47Q5SQN1 464 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 PLEKHS1Q5SXH7 462 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 STEAP4Q687X5 459 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 FOXR1Q6PIV2 292 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 UNC5AQ6ZN44 842 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 ZNF574Q6ZN55 896 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-205ENST00000409810 TMPRSS9Q7Z410 1059 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 GALNT7Q86SF2 657 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 DENND6AQ8IWF6 608 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 CNTN4Q8IWV2 1026 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 TBC1D21Q8IYX1 336 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 ZBED8Q8IZ13 594 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 SLC22A15Q8IZD6 547 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 KDF1Q8NAX2 398 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-205ENST00000409810 C2CD4AQ8NCU7 369 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-205ENST00000409810 AGBL5Q8NDL9 886 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 FBXO36Q8NEA4 188 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 OR5K2Q8NHB8 316 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 MDM1Q8TC05 714 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 LKAAEAR1Q8TD35 194 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 PWWP2AQ96N64 755 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 FOPNLQ96NB1 174 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 BIRC8Q96P09 236 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 RAB33BQ9H082 229 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 FBXO6Q9NRD1 293 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-205ENST00000409810 EPHA6Q9UF33 1036 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 POLG2Q9UHN1 485 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 SLC24A2Q9UI40 661 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 FBXO5Q9UKT4 447 aa10.63□□□□□ -0.71
CHMP3-205ENST00000409810 PRAMEF33A0A0G2JMD5 474 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 OR5K3A6NET4 321 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 TP73O15350 636 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 CAPN5O15484 640 aaPredicted RBP10.62□□□□□ -0.71
CHMP3-205ENST00000409810 NIPSNAP2O75323 286 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 GPC4O75487 556 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 TNFSF15O95150 251 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 S1PR4O95977 384 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 ANKRD34CP0C6C1 535 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 ERVK-10P10266 1014 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 AOAHP28039 575 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 ACADLP28330 430 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 ATP5DP30049 168 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 LEPRP48357 1165 aaKnown RBP10.62□□□□□ -0.71
CHMP3-205ENST00000409810 MPP1Q00013 466 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 CFHR1Q03591 330 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 CBLBQ13191 982 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 FRG1Q14331 258 aaKnown RBP10.62□□□□□ -0.71
CHMP3-205ENST00000409810 C16orf72Q14CZ0 275 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 TBC1D25Q3MII6 688 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 GLE1Q53GS7 698 aaKnown RBP10.62□□□□□ -0.71
CHMP3-205ENST00000409810 HP1BP3Q5SSJ5 553 aaPredicted RBP10.62□□□□□ -0.71
CHMP3-205ENST00000409810 TMEM164Q5U3C3 297 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 UGT3A1Q6NUS8 523 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 IRGCQ6NXR0 463 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 UNC5DQ6UXZ4 953 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 NAPRTQ6XQN6 538 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 CEP128Q6ZU80 1094 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 PROSER1Q86XN7 944 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 DCUN1D3Q8IWE4 304 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 PALM2Q8IXS6 379 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 MMGT1Q8N4V1 131 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 RCBTB1Q8NDN9 531 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 PYROXD1Q8WU10 500 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 SKA2Q8WVK7 121 aaPredicted RBP10.62□□□□□ -0.71
CHMP3-205ENST00000409810 LCN9Q8WX39 176 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 RSC1A1Q92681 617 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 KCNJ9Q92806 393 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 ART4Q93070 314 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 C9orf72Q96LT7 481 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 TGM7Q96PF1 710 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 CD180Q99467 661 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 HGH1Q9BTY7 390 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 FAM129AQ9BZQ8 928 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 SRMSQ9H3Y6 488 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 TFB2MQ9H5Q4 396 aaKnown RBP10.62□□□□□ -0.71
CHMP3-205ENST00000409810 NSMCE4AQ9NXX6 385 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 GRHL1Q9NZI5 618 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 OGFRQ9NZT2 677 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 TMEM9Q9P0T7 183 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 PDP2Q9P2J9 529 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 KLHL42Q9P2K6 505 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 PISDQ9UG56 409 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 KLHL3Q9UH77 587 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 ANKRD12Q6UB98 2062 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 PCM1Q15154 2024 aa10.62□□□□□ -0.71
CHMP3-205ENST00000409810 BHMG1C9JSJ3 638 aaPredicted RBP10.61□□□□□ -0.71
CHMP3-205ENST00000409810 VPS26AO75436 327 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms