RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PHTF1Q9UMS5 762 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 CHMP2BQ9UQN3 213 aa12.5□□□□□ -0.41
CHRNA1-205ENST00000409542 SPTBN1Q01082 2364 aaKnown RBP12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 IQANK1A0A1B0GTG1 560 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 A0A1W2PPM1 405 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 TM9SF1O15321 606 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 PDHA1P08559 390 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 RNF224P0DH78 156 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 CYP2A6P11509 494 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 TPSB2P20231 275 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 RBL1P28749 1068 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 RPA3P35244 121 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 RENBPP51606 427 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 PTSQ03393 145 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 DPTQ07507 201 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 IHHQ14623 411 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 EFTUD2Q15029 972 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 TPSAB1Q15661 275 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 ZKSCAN8Q15776 578 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 TMCO4Q5TGY1 634 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 HHATQ5VTY9 493 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 WDR74Q6RFH5 385 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 IGDCC3Q8IVU1 814 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 C4orf33Q8N1A6 199 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 PIH1D2Q8WWB5 315 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 SLC44A1Q8WWI5 657 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 SCRN2Q96FV2 425 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 NUDCD1Q96RS6 583 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 PITPNM3Q9BZ71 974 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 RAB6BQ9NRW1 208 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 KLC4Q9NSK0 619 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 UNC79Q9P2D8 2635 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 KLHL14Q9P2G3 628 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 TBC1D29Q9UFV1 150 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 RPS6KL1Q9Y6S9 549 aa12.49□□□□□ -0.41
CHRNA1-205ENST00000409542 TNRC6AQ8NDV7 1962 aaKnown RBP12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 HACD1B0YJ81 288 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 PSMD11O00231 422 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 INPP4BO15327 924 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 EDF1O60869 148 aaKnown RBP12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 DNAJC6O75061 913 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 SOCS5O75159 536 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 ZNF189O75820 626 aaPredicted RBP12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 UBOX5O94941 541 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 KRT4P19013 534 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 MAPK9P45984 424 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 HHEXQ03014 270 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 DPYSQ14117 519 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 ERV3-1Q14264 604 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 SLC1A5Q15758 541 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 PPP6R3Q5H9R7 873 aaPredicted RBP12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 ADAMTSL4Q6UY14 1074 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 BANPQ8N9N5 519 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 LRRC8CQ8TDW0 803 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 COX14Q96I36 57 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 CSPG4P5Q96PW8 444 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 MCCC1Q96RQ3 725 aaPredicted RBP12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 EFHD1Q9BUP0 239 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 TBC1D10AQ9BXI6 508 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 SIDT1Q9NXL6 827 aaKnown RBP12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 KCTD5Q9NXV2 234 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 DONSONQ9NYP3 566 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 PLEKHB1Q9UF11 243 aaPredicted RBP12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 HEY1Q9Y5J3 304 aa12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 OAS3Q9Y6K5 1087 aaKnown RBP12.48□□□□□ -0.41
CHRNA1-205ENST00000409542 TCRBV9S1A1TA0A576 114 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 POLR1CO15160 346 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 PGLSO95336 258 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 MT-ND3P03897 115 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 GNLYP22749 145 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 SKIV2L2P42285 1042 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 MAGEA3P43357 314 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 GFERP55789 205 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 SLC18A2Q05940 514 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 BNIP1Q12981 228 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 PEX6Q13608 980 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 SEPT6Q14141 434 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 ZNF235Q14590 738 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 CRTC2Q53ET0 693 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 LRRC66Q68CR7 880 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 CYB5D1Q6P9G0 228 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 IYDQ6PHW0 289 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 BZW1Q7L1Q6 419 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 CHST15Q7LFX5 561 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 GALNT13Q8IUC8 556 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 TAB3Q8N5C8 712 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 CCDC63Q8NA47 563 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 TEX19Q8NA77 164 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 AP2M1Q96CW1 435 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 ZNF599Q96NL3 588 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 PAIP2Q9BPZ3 127 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 MGME1Q9BQP7 344 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 ZPBPQ9BS86 351 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 SARS2Q9NP81 518 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 ZNHIT2Q9UHR6 403 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 ZNF180Q9UJW8 692 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 CROTQ9UKG9 612 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 TLK1Q9UKI8 766 aa12.47□□□□□ -0.41
CHRNA1-205ENST00000409542 CNOT6Q9ULM6 557 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms