RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ITGB7P26010 798 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 PSMD8P48556 350 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 KCNK10P57789 538 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 TCAIMQ8N3R3 496 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 TERB1Q8NA31 727 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 SLC45A3Q96JT2 553 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 VPS35Q96QK1 796 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 BRINP2Q9C0B6 783 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 IL1RL2Q9HB29 575 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 TRPV4Q9HBA0 871 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 FFAR3O14843 346 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 GPR42O15529 346 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 SLC22A3O75751 556 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 BCAS2O75934 225 aaPredicted RBP20.27■□□□□ 0.84
USP39-203ENST00000409470 EBLN1P0CF75 366 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 MRPL19P49406 292 aaKnown RBP20.27■□□□□ 0.84
USP39-203ENST00000409470 CDKL1Q00532 357 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 SP140Q13342 867 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 ELAVL3Q14576 367 aaKnown RBP20.27■□□□□ 0.84
USP39-203ENST00000409470 PDCD4Q53EL6 469 aaKnown RBP20.27■□□□□ 0.84
USP39-203ENST00000409470 NAIF1Q69YI7 327 aaPredicted RBP20.27■□□□□ 0.84
USP39-203ENST00000409470 VITQ6UXI7 678 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 CPA6Q8N4T0 437 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 ARRDC3Q96B67 414 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 SPDL1Q96EA4 605 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 SLC39A3Q9BRY0 314 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 NTMT1Q9BV86 223 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 SLC32A1Q9H598 525 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 KLQ9UEF7 1012 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 COQ6Q9Y2Z9 468 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 RNF11Q9Y3C5 154 aa20.27■□□□□ 0.84
USP39-203ENST00000409470 LOC730098B7Z3J9 87 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 INPP4BO15327 924 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 SLC16A5O15375 505 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 ATP6V1C1P21283 382 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 UFM1P61960 85 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 MAP7D1Q3KQU3 841 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 SYTL3Q4VX76 610 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 C8orf82Q6P1X6 216 aaPredicted RBP20.26■□□□□ 0.83
USP39-203ENST00000409470 UCMAQ8WVF2 138 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 ASB9Q96DX5 294 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 TEX37Q96LM6 180 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 TMEM181Q9P2C4 612 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 MAP10Q9P2G4 905 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 EPS15L1Q9UBC2 864 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 SUCOQ9UBS9 1254 aaKnown RBP20.26■□□□□ 0.83
USP39-203ENST00000409470 TRPS1Q9UHF7 1281 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 EPOPA6NHQ4 379 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 H0Y858 1186 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 H3BNX3 289 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 LSM1O15116 133 aaKnown RBP20.26■□□□□ 0.83
USP39-203ENST00000409470 ACADSP16219 412 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 SLC7A2P52569 658 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 MRPS22P82650 360 aaKnown RBP20.26■□□□□ 0.83
USP39-203ENST00000409470 ELP6Q0PNE2 266 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 SAMD4BQ5PRF9 694 aaKnown RBP20.26■□□□□ 0.83
USP39-203ENST00000409470 TTC23LQ6PF05 361 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 RNF111Q6ZNA4 994 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 NEK10Q6ZWH5 1172 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 YAF2Q8IY57 180 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 RASGEF1AQ8N9B8 481 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 MCOLN3Q8TDD5 553 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 TSPEARQ8WU66 669 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 PPP2R3CQ969Q6 453 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 DTD2Q96FN9 168 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 PPP1R16AQ96I34 528 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 HOPXQ9BPY8 73 aaPredicted RBP20.26■□□□□ 0.83
USP39-203ENST00000409470 DYRK4Q9NR20 520 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 GID8Q9NWU2 228 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 ZIM2Q9NZV7 527 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 MSRAQ9UJ68 235 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 CDH7Q9ULB5 785 aa20.26■□□□□ 0.83
USP39-203ENST00000409470 TRANK1O15050 2925 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 PLK4O00444 970 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 ACOT8O14734 319 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 SPINT1O43278 529 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 RGS14O43566 566 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 TSPAN6O43657 245 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 GGT5P36269 586 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 HNMTP50135 292 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 EMX2Q04743 252 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 TMEM115Q12893 351 aaPredicted RBP20.25■□□□□ 0.83
USP39-203ENST00000409470 TRIM25Q14258 630 aaKnown RBP20.25■□□□□ 0.83
USP39-203ENST00000409470 GRM2Q14416 872 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 AP5B1Q2VPB7 878 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 HABP4Q5JVS0 413 aaKnown RBP20.25■□□□□ 0.83
USP39-203ENST00000409470 LRRC70Q7Z2Q7 622 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 SUSD6Q92537 303 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 PPP3R2Q96LZ3 170 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 COQ10AQ96MF6 247 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 FAM129BQ96TA1 746 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 TMEM245Q9H330 911 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 ACTR8Q9H981 624 aa20.25■□□□□ 0.83
USP39-203ENST00000409470 TCF20Q9UGU0 1960 aaKnown RBP20.25■□□□□ 0.83
USP39-203ENST00000409470 A0A1W2PP18 115 aa20.24■□□□□ 0.83
USP39-203ENST00000409470 PRORSD1PA6NEY8 169 aa20.24■□□□□ 0.83
USP39-203ENST00000409470 GFYI3L273 518 aa20.24■□□□□ 0.83
USP39-203ENST00000409470 ATG13O75143 517 aa20.24■□□□□ 0.83
USP39-203ENST00000409470 ULK1O75385 1050 aa20.24■□□□□ 0.83
USP39-203ENST00000409470 WDR47O94967 919 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms