RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CD70P32970 193 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 PREPP48147 710 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 TUFMP49411 452 aaKnown RBP13.15□□□□□ -0.3
COL6A2-204ENST00000409416 NUP107P57740 925 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 NAA20P61599 178 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 SIM2Q14190 667 aaPredicted RBP13.15□□□□□ -0.3
COL6A2-204ENST00000409416 NANOGP8Q6NSW7 305 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 BLOC1S3Q6QNY0 202 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 NPAS4Q8IUM7 802 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 OR56A4Q8NGH8 313 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 BIRC7Q96CA5 298 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 MYO19Q96H55 970 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 LINC00597Q9H2U6 94 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 NANOGQ9H9S0 305 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 FANCEQ9HB96 536 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 WNT6Q9Y6F9 365 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 MROH6A6NGR9 719 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 AQP12BA6NM10 295 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 H7C4K7 107 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 WDR47O94967 919 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 TYMPP19971 482 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 CCR3P51677 355 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 PARP15Q460N3 678 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 SYTL3Q4VX76 610 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 SERPINA13PQ6UXR4 307 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 AQP12AQ8IXF9 295 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 GIPC3Q8TF64 312 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 ELMO1Q92556 727 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 RELTQ969Z4 430 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 MUS81Q96NY9 551 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 ATOH8Q96SQ7 321 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 CAPN10Q9HC96 672 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 AGPAT4Q9NRZ5 378 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 RIC8BQ9NVN3 520 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 MARCH5Q9NX47 278 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 LEF1Q9UJU2 399 aaPredicted RBP13.15□□□□□ -0.3
COL6A2-204ENST00000409416 ZNF490Q9ULM2 529 aaPredicted RBP13.15□□□□□ -0.3
COL6A2-204ENST00000409416 A0A1W2PP18 115 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 GNG14A0A1W2PPG7 69 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 SYCE1LA8MT33 242 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 PRMT5O14744 637 aaPredicted RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 KERAO60938 352 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 RSL1D1O76021 490 aaKnown RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 CXCL14O95715 111 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 IL7RP16871 459 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 RGS4P49798 205 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 RAB39AQ14964 217 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 KANK2Q63ZY3 851 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 TBPL2Q6SJ96 375 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 AFTPHQ6ULP2 937 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 SPRED2Q7Z698 418 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 LRRC49Q8IUZ0 686 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 PSD4Q8NDX1 1056 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 TMEM125Q96AQ2 219 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 RPF2Q9H7B2 306 aaKnown RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 ARNT2Q9HBZ2 717 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 MRPL17Q9NRX2 175 aaKnown RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 ITM2BQ9Y287 266 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 SLC45A1Q9Y2W3 748 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 MYLKQ15746 1914 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 ZFC3H1O60293 1989 aaKnown RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 ZSWIM8A7E2V4 1837 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 TRBV23OR9-2A0A075B6M9 112 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 ZNF182P17025 639 aaPredicted RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 SOAT1P35610 550 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 TGFBIQ15582 683 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 AASDHQ4L235 1098 aaPredicted RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 AARS2Q5JTZ9 985 aaKnown RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 ADGRF1Q5T601 910 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 IER5LQ5T953 404 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 SYTL1Q8IYJ3 562 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 OR2T11Q8NH01 316 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 MYRFLQ96LU7 910 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 UROC1Q96N76 676 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 OSGEPL1Q9H4B0 414 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 SMURF2Q9HAU4 748 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 SDR39U1Q9NRG7 319 aaPredicted RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 RASSF1Q9NS23 344 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 SPASTQ9UBP0 616 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 TSC22D4Q9Y3Q8 395 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 CABIN1Q9Y6J0 2220 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 A0A1B0GVM2 712 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 LINC00854A0A1B0GVQ3 168 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 TRIM43BA6NCK2 446 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 hCG_2039718K7EN88 272 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 TOR1BO14657 336 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 DFNA5O60443 496 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 ZNF7P17097 686 aaPredicted RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 HOXD9P28356 352 aaPredicted RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 CAPGP40121 348 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 CHRNB3Q05901 458 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 MGAT3Q09327 533 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 SELPLGQ14242 412 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 ABRAXAS2Q15018 415 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 RFTN2Q52LD8 501 aaPredicted RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 LETMD1Q6P1Q0 360 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 KIAA2013Q8IYS2 634 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 OR52J3Q8NH60 311 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 HM13Q8TCT9 377 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 FUBP1Q96AE4 644 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms