RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 TBC1D21Q8IYX1 336 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 SFRP1Q8N474 314 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 PNPLA1Q8N8W4 532 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 OR4C6Q8NH72 309 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 MRRFQ96E11 262 aaKnown RBP12.74□□□□□ -0.37
LIMS2-203ENST00000409254 OSGEPL1Q9H4B0 414 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 STN1Q9H668 368 aaKnown RBP12.74□□□□□ -0.37
LIMS2-203ENST00000409254 RDH14Q9HBH5 336 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 TMBIM4Q9HC24 238 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 SARS2Q9NP81 518 aaKnown RBP12.74□□□□□ -0.37
LIMS2-203ENST00000409254 SEMA4GQ9NTN9 838 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 ZNF446Q9NWS9 450 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 CTNNAL1Q9UBT7 734 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 TBK1Q9UHD2 729 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 DCDC2Q9UHG0 476 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 POLG2Q9UHN1 485 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 TMCO1Q9UM00 188 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 KCNK6Q9Y257 313 aa12.74□□□□□ -0.37
LIMS2-203ENST00000409254 CNOT1A5YKK6 2376 aaKnown RBP12.73□□□□□ -0.37
LIMS2-203ENST00000409254 FAM221BA6H8Z2 402 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 SYCE1LA8MT33 242 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 HMGB1P1B2RPK0 211 aaPredicted RBP12.73□□□□□ -0.37
LIMS2-203ENST00000409254 PATE3B3GLJ2 98 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 AGPSO00116 658 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 FLRT2O43155 660 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 XRCC1P18887 633 aaPredicted RBP12.73□□□□□ -0.37
LIMS2-203ENST00000409254 PBLDP30039 288 aaPredicted RBP12.73□□□□□ -0.37
LIMS2-203ENST00000409254 GRK6P43250 576 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 CCT5P48643 541 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 PLA2G4EQ3MJ16 856 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 ACSBG2Q5FVE4 666 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 METTL2BQ6P1Q9 378 aaKnown RBP12.73□□□□□ -0.37
LIMS2-203ENST00000409254 IYDQ6PHW0 289 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 FAM83HQ6ZRV2 1179 aaPredicted RBP12.73□□□□□ -0.37
LIMS2-203ENST00000409254 DCUN1D3Q8IWE4 304 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 CPNE9Q8IYJ1 553 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 CENPLQ8N0S6 344 aaPredicted RBP12.73□□□□□ -0.37
LIMS2-203ENST00000409254 MINDY1Q8N5J2 469 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 ARL10Q8N8L6 244 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 ACVR1CQ8NER5 493 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 OR5K2Q8NHB8 316 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 LMX1AQ8TE12 382 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 ASB11Q8WXH4 323 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 KIAA1191Q96A73 305 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 TLCD1Q96CP7 247 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 LINGO1Q96FE5 620 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 APOPT1Q96IL0 206 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 SMC6Q96SB8 1091 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 SLC30A3Q99726 388 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 RAB11FIP5Q9BXF6 653 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 TCEAL2Q9H3H9 227 aaPredicted RBP12.73□□□□□ -0.37
LIMS2-203ENST00000409254 TFB2MQ9H5Q4 396 aaKnown RBP12.73□□□□□ -0.37
LIMS2-203ENST00000409254 CAB39LQ9H9S4 337 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 TM7SF3Q9NS93 570 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 TBC1D29Q9UFV1 150 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 MID2Q9UJV3 735 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 DOLKQ9UPQ8 538 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 PRKAB1Q9Y478 270 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 ST14Q9Y5Y6 855 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 COLEC10Q9Y6Z7 277 aa12.73□□□□□ -0.37
LIMS2-203ENST00000409254 SMIM23A6NLE4 172 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 PDZK1P1A8MUH7 402 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 PRPF4O43172 522 aaKnown RBP eCLIP12.72□□□□□ -0.37
LIMS2-203ENST00000409254 PHGDHO43175 533 aaKnown RBP12.72□□□□□ -0.37
LIMS2-203ENST00000409254 SASH3O75995 380 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 RBP1P09455 135 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 CCDC166P0CW27 439 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 MTHFD1P11586 935 aaKnown RBP12.72□□□□□ -0.37
LIMS2-203ENST00000409254 BRAFP15056 766 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 CD1DP15813 335 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 PNLIPP16233 465 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 KRT4P19013 534 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 CYP2A7P20853 494 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 CRHR1P34998 444 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 HSD17B2P37059 387 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 RPIAP49247 311 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 LIMK1P53667 647 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 UBE2IP63279 158 aaKnown RBP12.72□□□□□ -0.37
LIMS2-203ENST00000409254 NHLH1Q02575 133 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 NR1D2Q14995 579 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 ARHGAP19Q14CB8 494 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 CCDC153Q494R4 210 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 SLC30A9Q6PML9 568 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 TMEM207Q6UWW9 146 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 PRR23CQ6ZRP0 262 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 SLC9B2Q86UD5 537 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 GPR156Q8NFN8 814 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 STAG3L4Q8TBR4 150 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 RDH11Q8TC12 318 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 EEF1AKMT1Q8WVE0 214 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 TFGQ92734 400 aaPredicted RBP12.72□□□□□ -0.37
LIMS2-203ENST00000409254 SH3KBP1Q96B97 665 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 RMDN2Q96LZ7 410 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 SLC12A9Q9BXP2 914 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 TRIM54Q9BYV2 358 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 EPB41L1Q9H4G0 881 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 TMEM9BQ9NQ34 198 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 GRID1Q9ULK0 1009 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 DNAJC16Q9Y2G8 782 aa12.72□□□□□ -0.37
LIMS2-203ENST00000409254 PABPN1LA6NDY0 278 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms