RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 HSPA7P48741 367 aa17.39■□□□□ 0.38
SMPD4-202ENST00000409031 NKX2-5P52952 324 aaPredicted RBP17.39■□□□□ 0.38
SMPD4-202ENST00000409031 MS4A2Q01362 244 aa17.39■□□□□ 0.38
SMPD4-202ENST00000409031 TRMT11Q7Z4G4 463 aaKnown RBP17.39■□□□□ 0.38
SMPD4-202ENST00000409031 SLC15A3Q8IY34 581 aa17.39■□□□□ 0.38
SMPD4-202ENST00000409031 MINDY1Q8N5J2 469 aa17.39■□□□□ 0.38
SMPD4-202ENST00000409031 TNFAIP8L1Q8WVP5 186 aa17.39■□□□□ 0.38
SMPD4-202ENST00000409031 POFUT2Q9Y2G5 429 aa17.39■□□□□ 0.38
SMPD4-202ENST00000409031 HES2Q9Y543 173 aa17.39■□□□□ 0.38
SMPD4-202ENST00000409031 NR2E3Q9Y5X4 410 aa17.39■□□□□ 0.38
SMPD4-202ENST00000409031 SIX3O95343 332 aaPredicted RBP17.39■□□□□ 0.37
SMPD4-202ENST00000409031 PIGRP01833 764 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 TCEA1P23193 301 aaKnown RBP17.39■□□□□ 0.37
SMPD4-202ENST00000409031 TSTQ16762 297 aaKnown RBP17.39■□□□□ 0.37
SMPD4-202ENST00000409031 PGBD2Q6P3X8 592 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 CLP1Q92989 425 aaKnown RBP17.39■□□□□ 0.37
SMPD4-202ENST00000409031 INTS7Q9NVH2 962 aaKnown RBP17.39■□□□□ 0.37
SMPD4-202ENST00000409031 GADD45GO95257 159 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 LGALS2P05162 132 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 HTR1EP28566 365 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 MAPK8P45983 427 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 ALDH7A1P49419 539 aaKnown RBP17.39■□□□□ 0.37
SMPD4-202ENST00000409031 PRKAG1P54619 331 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 FAAH2Q6GMR7 532 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 MTSS1LQ765P7 747 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 FAM20CQ8IXL6 584 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 OR13J1Q8NGT2 312 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 PYURFQ96I23 114 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 FAM47E-STBD1D6RA91 191 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 SCAMP3O14828 347 aaKnown RBP17.39■□□□□ 0.37
SMPD4-202ENST00000409031 POU2F1P14859 743 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 MAGEA2P43356 314 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 CDKL1Q00532 357 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 KHDRBS2Q5VWX1 349 aaKnown RBP17.39■□□□□ 0.37
SMPD4-202ENST00000409031 ZNF613Q6PF04 617 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 TAF8Q7Z7C8 310 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 CHPT1Q8WUD6 406 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 DNAJB3Q8WWF6 145 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 NFKBIZQ9BYH8 718 aa17.39■□□□□ 0.37
SMPD4-202ENST00000409031 FBRSL1Q9HCM7 1045 aaKnown RBP17.39■□□□□ 0.37
SMPD4-202ENST00000409031 SPIN1Q9Y657 262 aaPredicted RBP17.39■□□□□ 0.37
SMPD4-202ENST00000409031 MYCLP1P12525 358 aaPredicted RBP17.38■□□□□ 0.37
SMPD4-202ENST00000409031 PRKACGP22612 351 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 SERPINA4P29622 427 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 RNASE12Q5GAN4 147 aaKnown RBP17.38■□□□□ 0.37
SMPD4-202ENST00000409031 C9orf57Q5W0N0 161 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 SLC2A7Q6PXP3 512 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 ZNF767PQ75MW2 155 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 SAMD7Q7Z3H4 446 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 WDR70Q9NW82 654 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 CPQQ9Y646 472 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 PLOD2O00469 737 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 VILLO15195 856 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 CREG1O75629 220 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 SNAPC5O75971 98 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 CSTF2P33240 577 aaKnown RBP eCLIP17.38■□□□□ 0.37
SMPD4-202ENST00000409031 DSC3Q14574 896 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 TMIEQ8NEW7 156 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 KLHL6Q8WZ60 621 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 HTATIP2Q9BUP3 242 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 CAPN10Q9HC96 672 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 TIGARQ9NQ88 270 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 ANKMY1Q9P2S6 941 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 PCDHB3Q9Y5E6 796 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 SPATA31A5Q5VU36 1347 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 SPATA31A7Q8IWB4 1347 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 GOT2P00505 430 aaKnown RBP17.38■□□□□ 0.37
SMPD4-202ENST00000409031 STOMP27105 288 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 PITPNAQ00169 270 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 MTAPQ13126 283 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 GRM2Q14416 872 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 LCN8Q6JVE9 175 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 TFAP2CQ92754 450 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 SLC29A1Q99808 456 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 TTYH2Q9BSA4 534 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 SEC14L4Q9UDX3 406 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 SEC14L3Q9UDX4 400 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 NUP50Q9UKX7 468 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 XRN1Q8IZH2 1706 aaKnown RBP17.38■□□□□ 0.37
SMPD4-202ENST00000409031 ZNF487B1APH4 448 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 BCAS1O75363 584 aaPredicted RBP17.38■□□□□ 0.37
SMPD4-202ENST00000409031 DARSP14868 501 aaKnown RBP17.38■□□□□ 0.37
SMPD4-202ENST00000409031 PRKACBP22694 351 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 ATXN1P54253 815 aaKnown RBP17.38■□□□□ 0.37
SMPD4-202ENST00000409031 GNASQ5JWF2 1037 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 WDR45BQ5MNZ6 344 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 PDE12Q6L8Q7 609 aaKnown RBP17.38■□□□□ 0.37
SMPD4-202ENST00000409031 SH3YL1Q96HL8 342 aaPredicted RBP17.38■□□□□ 0.37
SMPD4-202ENST00000409031 MAB21L2Q9Y586 359 aa17.38■□□□□ 0.37
SMPD4-202ENST00000409031 GNB5O14775 395 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 KDM4BO94953 1096 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 HSD17B1P14061 328 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 ACSL1P33121 698 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 GMPSP49915 693 aaPredicted RBP17.37■□□□□ 0.37
SMPD4-202ENST00000409031 UFM1P61960 85 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 CXorf57Q6NSI4 855 aaKnown RBP17.37■□□□□ 0.37
SMPD4-202ENST00000409031 FBXL19Q6PCT2 694 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 SLA2Q9H6Q3 261 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 RNF19AQ9NV58 838 aa17.37■□□□□ 0.37
SMPD4-202ENST00000409031 COL20A1Q9P218 1284 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms