RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 TFDP2Q14188 446 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 PTPRCAPQ14761 206 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 NR1D2Q14995 579 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 SPA17Q15506 151 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 GLE1Q53GS7 698 aaKnown RBP9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 SIRPB2Q5JXA9 342 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 PHF19Q5T6S3 580 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 TMC3Q7Z5M5 1100 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 TMEM139Q8IV31 216 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 SLC25A41Q8N5S1 370 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 ARFGAP2Q8N6H7 521 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 CCT6BQ92526 530 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 MRGPRX2Q96LB1 330 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 PANX2Q96RD6 677 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 SPATA16Q9BXB7 569 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 NSRP1Q9H0G5 558 aaKnown RBP9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 OR2AG1Q9H205 316 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 IL1RAPL1Q9NZN1 696 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 FOXJ2Q9P0K8 574 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 SLC23A2Q9UGH3 650 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 TSC22D4Q9Y3Q8 395 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 PCDHGB3Q9Y5G1 929 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 A0A0B4J203 849 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 IGHV5-10-1A0A0J9YXX1 117 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 LOC285095A0A1B0GVY8 99 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 A6NCN8 305 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 ZNF254O75437 659 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 SERPINB7O75635 380 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 RBL1P28749 1068 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 SLC5A2P31639 672 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 CTNNA1P35221 906 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 CYLC1P35663 651 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 WNT3AP56704 352 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 B2MP61769 119 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 ARHGAP40Q5TG30 622 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 FIP1L1Q6UN15 594 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 CRTC3Q6UUV7 619 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 ARHGEF18Q6ZSZ5 1173 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 CLEC14AQ86T13 490 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 JAMLQ86YT9 394 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 RCOR2Q8IZ40 523 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 CACNA2D3Q8IZS8 1091 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 LILRB2Q8N423 598 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 NAT14Q8WUY8 206 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 HTR3CQ8WXA8 447 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 ALG3Q92685 438 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 GRAMD1AQ96CP6 724 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 MED30Q96HR3 178 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 DESI2Q9BSY9 194 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 GPR63Q9BZJ6 419 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 MAGEE1Q9HCI5 957 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 PRDM8Q9NQV8 689 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 KLHL8Q9P2G9 620 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 CRNNQ9UBG3 495 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 DNPEPQ9ULA0 475 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 PACSIN2Q9UNF0 486 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 TLN1Q9Y490 2541 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 SCN8AQ9UQD0 1980 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 IGHV1OR21-1A0A087WYE8 117 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 PRAMEF33A0A0G2JMD5 474 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 GRID2IPA4D2P6 1211 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 RGSL1A5PLK6 1076 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 C9orf172C9J069 976 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 EFSO43281 561 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 GRID2O43424 1007 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 NUAK1O60285 661 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 PRAMEF10O60809 474 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 CPNE6O95741 557 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 NDST3O95803 873 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 HOXB1P14653 301 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 CALB2P22676 271 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 ARSDP51689 593 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 MAPK10P53779 464 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 TBL3Q12788 808 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 NFATC2Q13469 925 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 CNPY1Q3B7I2 92 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 ATP13A5Q4VNC0 1218 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 ZNF569Q5MCW4 686 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 RNF220Q5VTB9 566 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 DUS1LQ6P1R4 473 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 BBS12Q6ZW61 710 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 ADGRG6Q86SQ4 1221 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 ZNF547Q8IVP9 402 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 ALDH16A1Q8IZ83 802 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 SFRP1Q8N474 314 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 LRRC57Q8N9N7 239 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 NOA1Q8NC60 698 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 IPMKQ8NFU5 416 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 ZFPM2Q8WW38 1151 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 ZNF75CPQ92670 426 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 EFHD2Q96C19 240 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 POM121Q96HA1 1249 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 CCDC74BQ96LY2 380 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 KCNK17Q96T54 332 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 STRADBQ9C0K7 418 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 FAM153AQ9UHL3 310 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 SLC12A4Q9UP95 1085 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 PCDHA3Q9Y5H8 950 aa9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 GPC6Q9Y625 555 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-202ENST00000409020 MACROD2A1Z1Q3 448 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms