RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 OR6C70A6NIJ9 312 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 ARPC2O15144 300 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 SCGNO76038 276 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 UNGP13051 313 aaPredicted RBP12.78□□□□□ -0.36
RNF43-201ENST00000407977 CKMT2P17540 419 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 MAPK12P53778 367 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 USP41Q3LFD5 358 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 ZNF563Q8TA94 476 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 EFHD2Q96C19 240 aaPredicted RBP12.78□□□□□ -0.36
RNF43-201ENST00000407977 LRRC58Q96CX6 371 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 CNDP2Q96KP4 475 aaKnown RBP12.78□□□□□ -0.36
RNF43-201ENST00000407977 ZNF558Q96NG5 402 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 POLR2J3Q9H1A7 115 aaKnown RBP12.78□□□□□ -0.36
RNF43-201ENST00000407977 SEC14L4Q9UDX3 406 aa12.78□□□□□ -0.36
RNF43-201ENST00000407977 ZNF806P0C7X5 589 aa12.77□□□□□ -0.36
RNF43-201ENST00000407977 XRCC1P18887 633 aaPredicted RBP12.77□□□□□ -0.36
RNF43-201ENST00000407977 CSTF2P33240 577 aaKnown RBP eCLIP12.77□□□□□ -0.36
RNF43-201ENST00000407977 MAGEA2P43356 314 aa12.77□□□□□ -0.36
RNF43-201ENST00000407977 AP1S1P61966 158 aa12.77□□□□□ -0.36
RNF43-201ENST00000407977 CHIT1Q13231 466 aa12.77□□□□□ -0.36
RNF43-201ENST00000407977 NAE1Q13564 534 aa12.77□□□□□ -0.36
RNF43-201ENST00000407977 SERPINA13PQ6UXR4 307 aa12.77□□□□□ -0.36
RNF43-201ENST00000407977 AURKBQ96GD4 344 aaPredicted RBP12.77□□□□□ -0.36
RNF43-201ENST00000407977 PIWIL1Q96J94 861 aaKnown RBP12.77□□□□□ -0.36
RNF43-201ENST00000407977 FAM84AQ96KN4 292 aa12.77□□□□□ -0.36
RNF43-201ENST00000407977 TCF7L1Q9HCS4 588 aa12.77□□□□□ -0.36
RNF43-201ENST00000407977 PREBQ9HCU5 417 aa12.77□□□□□ -0.36
RNF43-201ENST00000407977 TMEM59LQ9UK28 342 aa12.77□□□□□ -0.36
RNF43-201ENST00000407977 GPSM3Q9Y4H4 160 aa12.77□□□□□ -0.36
RNF43-201ENST00000407977 ANXA2P2A6NMY6 339 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 FAM189A1O60320 539 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 NOBOXO60393 691 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 ANXA2P07355 339 aaKnown RBP12.77□□□□□ -0.37
RNF43-201ENST00000407977 TUSC3Q13454 348 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 KLHL35Q6PF15 583 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 ERMP1Q7Z2K6 904 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 TMEM110Q86TL2 294 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 KLHL36Q8N4N3 616 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 NEK7Q8TDX7 302 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 OR8D1Q8WZ84 308 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 RFT1Q96AA3 541 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 NKX1-2Q9UD57 310 aaPredicted RBP12.77□□□□□ -0.37
RNF43-201ENST00000407977 NUP50Q9UKX7 468 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 KANTRA0A1W2PQU2 76 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 BCAS2O75934 225 aaPredicted RBP12.77□□□□□ -0.37
RNF43-201ENST00000407977 ZNF773Q6PK81 442 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 OR10G2Q8NGC3 310 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 CEP295NLQ96MC4 621 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 HNRNPABQ99729 332 aaKnown RBP12.77□□□□□ -0.37
RNF43-201ENST00000407977 PCDHAC1Q9H158 963 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 C11orf16Q9NQ32 467 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 CCDC177Q9NQR7 707 aaPredicted RBP12.77□□□□□ -0.37
RNF43-201ENST00000407977 ISPDA4D126 451 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 GRM6O15303 877 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 PRPS1L1P21108 318 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 GSTM3P21266 225 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 CLCN4P51793 760 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 GNA12Q03113 381 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 IL10RBQ08334 325 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 EIPR1Q53HC9 387 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 IDNKQ5T6J7 187 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 DEFB128Q7Z7B8 93 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 ART5Q96L15 291 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 NIFKQ9BYG3 293 aaKnown RBP12.77□□□□□ -0.37
RNF43-201ENST00000407977 PIK3C2BO00750 1634 aa12.77□□□□□ -0.37
RNF43-201ENST00000407977 AGLP35573 1532 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 KRT33AO76009 404 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 PRAMEF12O95522 483 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 GOT2P00505 430 aaKnown RBP12.76□□□□□ -0.37
RNF43-201ENST00000407977 NPPAP01160 153 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 CD48P09326 243 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 ZNF404Q494X3 552 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 PCBD2Q9H0N5 130 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 EIF2B4Q9UI10 523 aaKnown RBP12.76□□□□□ -0.37
RNF43-201ENST00000407977 CACNB4O00305 520 aaPredicted RBP12.76□□□□□ -0.37
RNF43-201ENST00000407977 TMEM63AO94886 807 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 MTPNP58546 118 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 DPYSL2Q16555 572 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 CHST4Q8NCG5 386 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 PCDH19Q8TAB3 1148 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 IRF2BPLQ9H1B7 796 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 DPAGT1Q9H3H5 408 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 TVP23BQ9NYZ1 205 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 ZNF639Q9UID6 485 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 PCDHGB6Q9Y5F9 930 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 PXDNQ92626 1479 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 CNTNAP1P78357 1384 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 SMIM35A0A1B0GVV1 85 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 CAPN15O75808 1086 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 APOL3O95236 402 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 EPHX2P34913 555 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 SLC18A2Q05940 514 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 TRMT10BQ6PF06 316 aaKnown RBP12.76□□□□□ -0.37
RNF43-201ENST00000407977 LINGO2Q7L985 606 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 ADGRG6Q86SQ4 1221 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 DNASE1L2Q92874 299 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 ZFP3Q96NJ6 502 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 IFT46Q9NQC8 304 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 FARSBQ9NSD9 589 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms