RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 MYRIPQ8NFW9 859 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 DCAKDQ8WVC6 231 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 TFGQ92734 400 aaPredicted RBP28.64■■■□□ 2.18
USP42-202ENST00000404008 STN1Q9H668 368 aaKnown RBP28.64■■■□□ 2.18
USP42-202ENST00000404008 CAB39LQ9H9S4 337 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 DLL3Q9NYJ7 618 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 ZNF180Q9UJW8 692 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 HEBP2Q9Y5Z4 205 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 DCHS1Q96JQ0 3298 aa28.64■■■□□ 2.18
USP42-202ENST00000404008 PRAMEF33A0A0G2JMD5 474 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 HMX2A2RU54 273 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 VIPP01282 170 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 SHBGP04278 402 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 CBSLP0DN79 551 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 CEACAM1P13688 526 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 CBSP35520 551 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 ACADVLP49748 655 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 BIRC2Q13490 618 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 CEP97Q8IW35 865 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 IFI44Q8TCB0 444 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 CCDC74AQ96AQ1 378 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 POPDC3Q9HBV1 291 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 SLC40A1Q9NP59 571 aa28.63■■■□□ 2.17
USP42-202ENST00000404008 RHPN2P1A8MT19 583 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 EIF3FO00303 357 aaPredicted RBP28.62■■■□□ 2.17
USP42-202ENST00000404008 ENO3P13929 434 aaPredicted RBP28.62■■■□□ 2.17
USP42-202ENST00000404008 PNLIPP16233 465 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 ZNF460Q14592 562 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 USP10Q14694 798 aaKnown RBP28.62■■■□□ 2.17
USP42-202ENST00000404008 PERM1Q5SV97 790 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 NEK10Q6ZWH5 1172 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 TSPAN17Q96FV3 270 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 CCDC77Q9BR77 488 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 TOR4AQ9NXH8 423 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 TSR3Q9UJK0 312 aaKnown RBP28.62■■■□□ 2.17
USP42-202ENST00000404008 SERPINB9P50453 376 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 NOVA1P51513 510 aaKnown RBP28.62■■■□□ 2.17
USP42-202ENST00000404008 SLC12A2P55011 1212 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 ABRQ12979 859 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 BMPR2Q13873 1038 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 NR1D2Q14995 579 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 MROH9Q5TGP6 573 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 RBM12BQ8IXT5 1001 aaKnown RBP28.62■■■□□ 2.17
USP42-202ENST00000404008 EEF1AKMT1Q8WVE0 214 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 SKA2Q8WVK7 121 aaPredicted RBP28.62■■■□□ 2.17
USP42-202ENST00000404008 COLEC10Q9Y6Z7 277 aa28.62■■■□□ 2.17
USP42-202ENST00000404008 CCDC151A5D8V7 595 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 GIPC1O14908 333 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 MATN4O95460 622 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 GP1BAP07359 652 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 ZKSCAN8Q15776 578 aaPredicted RBP28.61■■■□□ 2.17
USP42-202ENST00000404008 UNC5DQ6UXZ4 953 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 TAOK1Q7L7X3 1001 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 PHC3Q8NDX5 983 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 SH3KBP1Q96B97 665 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 FERD3LQ96RJ6 166 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 MVB12BQ9H7P6 319 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 UCK1Q9HA47 277 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 SLC24A2Q9UI40 661 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 RUVBL2Q9Y230 463 aaKnown RBP28.61■■■□□ 2.17
USP42-202ENST00000404008 ASF1AQ9Y294 204 aa28.61■■■□□ 2.17
USP42-202ENST00000404008 RP1P56715 2156 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 ASXL3Q9C0F0 2248 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 SPAARA0A1B0GVQ0 90 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 ERLIN1O75477 346 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 KCNK5O95279 499 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 WISP3O95389 354 aaPredicted RBP28.6■■■□□ 2.17
USP42-202ENST00000404008 NUDT17P0C025 328 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 MPC1LP0DKB6 136 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 STMN1P16949 149 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 ZNF37AP17032 561 aaPredicted RBP28.6■■■□□ 2.17
USP42-202ENST00000404008 CNTFP26441 200 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 NDUFS1P28331 727 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 RGS4P49798 205 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 GPR18Q14330 331 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 LRRC8EQ6NSJ5 796 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 ADGRD1Q6QNK2 874 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 TMEM207Q6UWW9 146 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 ZNF761Q86XN6 746 aaPredicted RBP28.6■■■□□ 2.17
USP42-202ENST00000404008 OR5AR1Q8NGP9 310 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 OR5K2Q8NHB8 316 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 CFAP61Q8NHU2 1237 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 CCDC3Q9BQI4 270 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 NFS1Q9Y697 457 aa28.6■■■□□ 2.17
USP42-202ENST00000404008 KRT38O76015 456 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 TSPAN12O95859 305 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 GPR3P46089 330 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 IL2P60568 153 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 RAB10P61026 200 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 ILKQ13418 452 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 KRT33BQ14525 404 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 CYHR1Q6ZMK1 362 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 TMEM26Q6ZUK4 368 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 PIWIL4Q7Z3Z4 852 aaKnown RBP28.59■■■□□ 2.17
USP42-202ENST00000404008 TBC1D21Q8IYX1 336 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 ZFPM2Q8WW38 1151 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 LINGO1Q96FE5 620 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 SLC38A3Q99624 504 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 LDHAL6BQ9BYZ2 381 aaPredicted RBP28.59■■■□□ 2.17
USP42-202ENST00000404008 TRIT1Q9H3H1 467 aaKnown RBP28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms