RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 TRPM6Q9BX84 2022 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 ATP6AP2A0A1C7CYW4 349 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 CRCPO75575 148 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 ATP6AP2O75787 350 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 RASSF9O75901 435 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 C7P10643 843 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 UROSP10746 265 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 GLULP15104 373 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 CD1EP15812 388 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 CYP2A7P20853 494 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 CDK3Q00526 305 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 TRAF3Q13114 568 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 OR14C36Q8NHC7 312 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 IPPKQ9H8X2 491 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 TMEM98Q9Y2Y6 226 aa25.07■■□□□ 1.6
CPNE1-205ENST00000401607 PCYT1BQ9Y5K3 369 aaPredicted RBP25.07■■□□□ 1.6
CPNE1-205ENST00000401607 B2RBV5 119 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 K7EPI3 171 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 GIPC1O14908 333 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 PSIP1O75475 530 aaKnown RBP25.06■■□□□ 1.6
CPNE1-205ENST00000401607 PIK3R1P27986 724 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 PDHA2P29803 388 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 PRDX6P30041 224 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 GGT5P36269 586 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 ADPRHP54922 357 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 ABRQ12979 859 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 TP53I13Q8NBR0 393 aaPredicted RBP25.06■■□□□ 1.6
CPNE1-205ENST00000401607 RPLP0P6Q8NHW5 317 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 ZNF514Q96K75 400 aaPredicted RBP25.06■■□□□ 1.6
CPNE1-205ENST00000401607 LGR4Q9BXB1 951 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 C1QTNF2Q9BXJ5 285 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 GPR34Q9UPC5 381 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 TRIOBPQ9H2D6 2365 aa25.06■■□□□ 1.6
CPNE1-205ENST00000401607 KRT87PA6NCN2 255 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 SLC22A2O15244 555 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 HIST1H2AGP0C0S8 130 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-205ENST00000401607 HIST1H2ADP20671 130 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 RPS21P63220 83 aaKnown RBP25.05■■□□□ 1.6
CPNE1-205ENST00000401607 ELF3P78545 371 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-205ENST00000401607 CCINQ13939 588 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 IRF4Q15306 451 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 SMAD2Q15796 467 aaKnown RBP25.05■■□□□ 1.6
CPNE1-205ENST00000401607 TMEM259Q4ZIN3 620 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 DDIASQ8IXT1 998 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 TCAIMQ8N3R3 496 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 CDYL2Q8N8U2 506 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 OR4F6Q8NGB9 312 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 KLK6Q92876 244 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 HIST1H2AHQ96KK5 128 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 HIST1H2AJQ99878 128 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 H2AFJQ9BTM1 129 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 CADM1Q9BY67 442 aaKnown RBP25.05■■□□□ 1.6
CPNE1-205ENST00000401607 OSBPL6Q9BZF3 934 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 AKTIPQ9H8T0 292 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 PRR23AA6NEV1 266 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 ARHGEF33A8MVX0 844 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 LIN7AO14910 233 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-205ENST00000401607 GYG2O15488 501 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 STK16O75716 305 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 PAK4O96013 591 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-205ENST00000401607 ADSLP30566 484 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-205ENST00000401607 AP1S2P56377 157 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 CDC16Q13042 620 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.05■■□□□ 1.6
CPNE1-205ENST00000401607 KIAA1161Q6NSJ0 714 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 CRTC3Q6UUV7 619 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 TMEM92Q6UXU6 159 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 C11orf96Q7Z7L8 435 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 RBM15BQ8NDT2 890 aaKnown RBP25.05■■□□□ 1.6
CPNE1-205ENST00000401607 MCOLN3Q8TDD5 553 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 FAM3CQ92520 227 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 FOXJ1Q92949 421 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 CMTM5Q96DZ9 223 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 SIPA1Q96FS4 1042 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 RAB3IPQ96QF0 476 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-205ENST00000401607 TEX101Q9BY14 249 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 SCML1Q9UN30 329 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 STK38LQ9Y2H1 464 aa25.05■■□□□ 1.6
CPNE1-205ENST00000401607 A0A1W2PQU0 124 aa25.04■■□□□ 1.6
CPNE1-205ENST00000401607 RNGTTO60942 597 aaKnown RBP25.04■■□□□ 1.6
CPNE1-205ENST00000401607 POP7O75817 140 aaKnown RBP25.04■■□□□ 1.6
CPNE1-205ENST00000401607 OTCP00480 354 aa25.04■■□□□ 1.6
CPNE1-205ENST00000401607 LINC00032P0C843 101 aa25.04■■□□□ 1.6
CPNE1-205ENST00000401607 COX4I1P13073 169 aa25.04■■□□□ 1.6
CPNE1-205ENST00000401607 TEAD1P28347 426 aa25.04■■□□□ 1.6
CPNE1-205ENST00000401607 FBXO43Q4G163 708 aa25.04■■□□□ 1.6
CPNE1-205ENST00000401607 EFL1Q7Z2Z2 1120 aaKnown RBP25.04■■□□□ 1.6
CPNE1-205ENST00000401607 LONP2Q86WA8 852 aa25.04■■□□□ 1.6
CPNE1-205ENST00000401607 CFAP206Q8IYR0 622 aa25.04■■□□□ 1.6
CPNE1-205ENST00000401607 CFAP61Q8NHU2 1237 aa25.04■■□□□ 1.6
CPNE1-205ENST00000401607 MSANTD3Q96H12 275 aa25.04■■□□□ 1.6
CPNE1-205ENST00000401607 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.04■■□□□ 1.68e-7■□□□□ 11.1
CPNE1-205ENST00000401607 POLG2Q9UHN1 485 aa25.04■■□□□ 1.6
CPNE1-205ENST00000401607 ANGPTL3Q9Y5C1 460 aa25.04■■□□□ 1.6
CPNE1-205ENST00000401607 C17orf113A0A1B0GUU1 675 aa25.03■■□□□ 1.6
CPNE1-205ENST00000401607 CHUKO15111 745 aa25.03■■□□□ 1.6
CPNE1-205ENST00000401607 UBDO15205 165 aa25.03■■□□□ 1.6
CPNE1-205ENST00000401607 GSC2O15499 205 aa25.03■■□□□ 1.6
CPNE1-205ENST00000401607 CD72P21854 359 aa25.03■■□□□ 1.6
CPNE1-205ENST00000401607 SLC6A12P48065 614 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms