RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 TRMOQ9BU70 441 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 DUSP16Q9BY84 665 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 MARCH4Q9P2E8 410 aaPredicted RBP16.8■□□□□ 0.28
PTPRA-205ENST00000399903 PCM1Q15154 2024 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 ZW10O43264 779 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 AGTR2P50052 363 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 DEFA1P59665 94 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 DEFA3P59666 94 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 FKBP1BP68106 108 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 MRPS6P82932 125 aaKnown RBP16.8■□□□□ 0.28
PTPRA-205ENST00000399903 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.8■□□□□ 0.28
PTPRA-205ENST00000399903 GCNT7Q6ZNI0 430 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 BEND7Q8N7W2 519 aaPredicted RBP16.8■□□□□ 0.28
PTPRA-205ENST00000399903 PYCR2Q96C36 320 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 NECTIN4Q96NY8 510 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 KCNS3Q9BQ31 491 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 WDR6Q9NNW5 1121 aaKnown RBP16.8■□□□□ 0.28
PTPRA-205ENST00000399903 COQ3Q9NZJ6 369 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 FBXO10Q9UK96 956 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 ABT1Q9ULW3 272 aaKnown RBP16.8■□□□□ 0.28
PTPRA-205ENST00000399903 WBP11Q9Y2W2 641 aaKnown RBP16.8■□□□□ 0.28
PTPRA-205ENST00000399903 GMPPBQ9Y5P6 360 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 GPR45Q9Y5Y3 372 aa16.8■□□□□ 0.28
PTPRA-205ENST00000399903 ARVCFO00192 962 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 MTSS1O43312 755 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 DFNA5O60443 496 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 MOCS2O96007 188 aaPredicted RBP16.79■□□□□ 0.28
PTPRA-205ENST00000399903 OR4Q2P0C623 313 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 OR4D1Q15615 310 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 TAB1Q15750 504 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 TIGD5Q53EQ6 642 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 B3GNT8Q7Z7M8 397 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 TTC39CQ8N584 583 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 SMOQ99835 787 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 UGT2B28Q9BY64 529 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 OR2B2Q9GZK3 357 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 RNF112Q9ULX5 631 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 FAM92AA1XBS5 289 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 RGS10O43665 173 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 THP07101 528 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 AKR1A1P14550 325 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 KCNE1P15382 129 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 SDHAF4Q5VUM1 108 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 AGMOQ6ZNB7 445 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 PRR23CQ6ZRP0 262 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 C11orf74Q86VG3 221 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 HID1Q8IV36 788 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 RIMKLAQ8IXN7 391 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 PHACTR4Q8IZ21 702 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 SLC38A6Q8IZM9 456 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 PHF10Q8WUB8 498 aaKnown RBP16.79■□□□□ 0.28
PTPRA-205ENST00000399903 CLSTN3Q9BQT9 956 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 DNAJB9Q9UBS3 223 aa16.79■□□□□ 0.28
PTPRA-205ENST00000399903 KATNA1O75449 491 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 ZNF682O95780 498 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 IGFBP5P24593 272 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 CSRP3P50461 194 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 TTC23LQ6PF05 361 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 FBXO39Q8N4B4 442 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 PARP16Q8N5Y8 322 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 GOLM1Q8NBJ4 401 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 BTN2A3PQ96KV6 586 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 ZNF300Q96RE9 604 aaPredicted RBP16.78■□□□□ 0.28
PTPRA-205ENST00000399903 NPY6RQ99463 290 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 CHCHD6Q9BRQ6 235 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 USE1Q9NZ43 259 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 EHD3Q9NZN3 535 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 PCDH10Q9P2E7 1040 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 OPTCQ9UBM4 332 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 ZNF639Q9UID6 485 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 BTBD3Q9Y2F9 522 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 AGAP5A6NIR3 686 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 GOLGA8CPA6NN73 597 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 NCAM2O15394 837 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 ANXA9O76027 345 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 CYP11A1P05108 521 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 HTR1EP28566 365 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 GNG2P59768 71 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 CRY1Q16526 586 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 VARS2Q5ST30 1063 aaKnown RBP16.78■□□□□ 0.28
PTPRA-205ENST00000399903 PTRH1Q86Y79 214 aaKnown RBP16.78■□□□□ 0.28
PTPRA-205ENST00000399903 ZMIZ2Q8NF64 920 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 SCAMP5Q8TAC9 235 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 Q96MT0 163 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 GLOD4Q9HC38 313 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 MED26O95402 600 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 POLR2EP19388 210 aaKnown RBP16.78■□□□□ 0.28
PTPRA-205ENST00000399903 CCND3P30281 292 aaPredicted RBP16.78■□□□□ 0.28
PTPRA-205ENST00000399903 ARSDP51689 593 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 GABARAPL2P60520 117 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 CACNB2Q08289 660 aaPredicted RBP16.78■□□□□ 0.28
PTPRA-205ENST00000399903 PRKG2Q13237 762 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 RCAN2Q14206 197 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 TBRG1Q3YBR2 411 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 AGAP6Q5VW22 663 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 PAPD5Q8NDF8 572 aaKnown RBP16.78■□□□□ 0.28
PTPRA-205ENST00000399903 AGAP4Q96P64 663 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 YME1L1Q96TA2 773 aa16.78■□□□□ 0.28
PTPRA-205ENST00000399903 BARD1Q99728 777 aaKnown RBP16.78■□□□□ 0.28
PTPRA-205ENST00000399903 TBKBP1A7MCY6 615 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms