RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 CFAP20Q9Y6A4 193 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 LEFTY2O00292 366 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 B4GALT2O60909 372 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 LRIG2O94898 1065 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 POLR2JP52435 117 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 MED22Q15528 200 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 WDR93Q6P2C0 686 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 BRAT1Q6PJG6 821 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 ZBED6CLQ96FA7 236 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 USB1Q9BQ65 265 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 GDAP2Q9NXN4 497 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 HMGXB4Q9UGU5 601 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 PCYOX1Q9UHG3 505 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 ZNF222Q9UK12 451 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 FZD10Q9ULW2 581 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 CDC40O60508 579 aaKnown RBP eCLIP11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 TCF4P15884 667 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 ACVR2AP27037 513 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 GABRB2P47870 512 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 CACNA2D1P54289 1103 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 DAOAP59103 153 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 TDRD1Q9BXT4 1180 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 OAS3Q9Y6K5 1087 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 FZD9O00144 591 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 TRIM38O00635 465 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 ZMPSTE24O75844 475 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 SLC11A1P49279 550 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 SP140Q13342 867 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 RNASE12Q5GAN4 147 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 Q6ZVU0 165 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 CLVS1Q8IUQ0 354 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 SCAMP5Q8TAC9 235 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 KCTD13Q8WZ19 329 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 B4GALT7Q9UBV7 327 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 DNMT3AQ9Y6K1 912 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 TULP3O75386 442 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 TNFAIP8O95379 198 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 PTGER3P43115 390 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 ADAP2Q9NPF8 381 aa11.88□□□□□ -0.51
CACNA1C-213ENST00000399629 ATRNO75882 1429 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 CPSF4LA6NMK7 179 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 SOD2P04179 222 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 ALDH3A2P51648 485 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 C1orf216Q8TAB5 229 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 RGMAQ96B86 450 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 NMD3Q96D46 503 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 PTGES2Q9H7Z7 377 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 CCNB1IP1Q9NPC3 277 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 ARL5AQ9Y689 179 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 A0A0G2JN53 185 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 CHP2O43745 196 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 DUX1O43812 170 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 PSIP1O75475 530 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 IPO13O94829 963 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 CST3P01034 146 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 CAPGP40121 348 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 FGL2Q14314 439 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 MBOAT1Q6ZNC8 495 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 SLC26A9Q7LBE3 791 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 SLC34A3Q8N130 599 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 ATOH1Q92858 354 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 FAM83CQ9BQN1 747 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 KCNH6Q9H252 994 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 TRIM3O75382 744 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 ADGRF1Q5T601 910 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 FBXL16Q8N461 479 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 FAM110BQ8TC76 370 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 GRHL3Q8TE85 626 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 SNRNP27Q8WVK2 155 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 BAP1Q92560 729 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 EZH1Q92800 747 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 MIPEPQ99797 713 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 NSUN3Q9H649 340 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 PCDHGA6Q9Y5G7 932 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 UPK3BL1B0FP48 263 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 UPK3BL2E5RIL1 263 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 TPST2O60704 377 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 HNF1BP35680 557 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 VEGFBP49765 207 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 GATMP50440 423 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 MRPL49Q13405 166 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 PRAMEF14Q5SWL7 426 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 PRAMEF13Q5VWM6 474 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 SPATA22Q8NHS9 363 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 ABHD5Q8WTS1 349 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 IL1RAPQ9NPH3 570 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 TMEM98Q9Y2Y6 226 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 FABP3P05413 133 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 FHP07954 510 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 HLA-EP13747 358 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 CSF2RAP15509 400 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 STARP49675 285 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 IFI35P80217 286 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 WASHC2DQ5SRD0 308 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 TWIST2Q8WVJ9 160 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 CLEC4DQ8WXI8 215 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 TRIM63Q969Q1 353 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 DNAJC19Q96DA6 116 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 CST11Q9H112 138 aa11.87□□□□□ -0.51
CACNA1C-213ENST00000399629 SEC61A2Q9H9S3 476 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms