RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SPACA7Q96KW9 195 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 NSMCE3Q96MG7 304 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 EBPLQ9BY08 206 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 PRDM8Q9NQV8 689 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 PDP1Q9P0J1 537 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 SH3GLB1Q9Y371 365 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 MEIS3P2A8K0S8 358 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 FABP3P05413 133 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 PFKMP08237 780 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 TCF3P15923 654 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 CMPK1P30085 196 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 SLC7A1P30825 629 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 PTSQ03393 145 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 BIKQ13323 160 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 PDGFRLQ15198 375 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 MAPK11Q15759 364 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 MACC1Q6ZN28 852 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 WDR48Q8TAF3 677 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 KCNJ9Q92806 393 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 EFCAB11Q9BUY7 163 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 RIOK2Q9BVS4 552 aaKnown RBP13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 SERHL2Q9H4I8 314 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 SERHLQ9NQF3 203 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 ZIM2Q9NZV7 527 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 BTAF1O14981 1849 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 INPPL1O15357 1258 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 OAZ2O95190 189 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 ALDOAP04075 364 aaKnown RBP13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 ADARP55265 1226 aaKnown RBP13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 NFKB2Q00653 900 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 CYP4F3Q08477 520 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 TEAD4Q15561 434 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 BEND5Q7L4P6 421 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 PLD6Q8N2A8 252 aaKnown RBP13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 CLDN19Q8N6F1 224 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 SLC43A3Q8NBI5 491 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 ASB9Q96DX5 294 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 RIPOR3Q96MK2 946 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 MTERF1Q99551 399 aaKnown RBP13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 POPDC3Q9HBV1 291 aa13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 NLE1Q9NVX2 485 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA11-201ENST00000398587 MYH14Q7Z406 1995 aaKnown RBP13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 A0A0D9SEW6 157 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 LRRC72A6NJI9 287 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 CXCR6O00574 342 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 COCHO43405 550 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 ERN1O75460 977 aaKnown RBP13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 FGF18O76093 207 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 CBSLP0DN79 551 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 FGF3P11487 239 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 CYBAP13498 195 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 ALOX12P18054 663 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 CBSP35520 551 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 ROR2Q01974 943 aaKnown RBP13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 MTAPQ13126 283 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 GPM6BQ13491 265 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 LIN52Q52LA3 116 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 C22orf39Q6P5X5 142 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 ZNF783Q6ZMS7 281 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 FRMD7Q6ZUT3 714 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 MRPL10Q7Z7H8 261 aaKnown RBP13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 HERVK_113Q902F9 699 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 EXOSC8Q96B26 276 aaKnown RBP13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 IL12RB2Q99665 862 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 ZDHHC4Q9NPG8 344 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 CCDC189A1A4V9 331 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 H3BNX3 289 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 CYP11A1P05108 521 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 NCK1P16333 377 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 DNAJB13P59910 316 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 SIM2Q14190 667 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 RAB6CQ53S08 254 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 CHST15Q7LFX5 561 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 HID1Q8IV36 788 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 TEX47Q8TBZ9 253 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 EEF1AKMT1Q8WVE0 214 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 ARNTL2Q8WYA1 636 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 PYCR2Q96C36 320 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 ZHX1-C8orf76Q96EF9 292 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 FCRL3Q96P31 734 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 CDK15Q96Q40 435 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 CHID1Q9BWS9 393 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 TXLNGYQ9BZA5 131 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 RAB6CQ9H0N0 254 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 EPB41L1Q9H4G0 881 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 IFNW1P05000 195 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 PRPS1L1P21108 318 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 VIPR1P32241 457 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 GJA5P36382 358 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 HMGCS1Q01581 520 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 RSBN1Q5VWQ0 802 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 FAM92BQ6ZTR7 304 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 LRRC70Q7Z2Q7 622 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 PHTF2Q8N3S3 785 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 CLIP3Q96DZ5 547 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 IL36AQ9UHA7 158 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 TLL2Q9Y6L7 1015 aa13.98□□□□□ -0.17
PCDHGA11-201ENST00000398587 OR1F1O43749 312 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 MAFKO60675 156 aa13.97□□□□□ -0.17
PCDHGA11-201ENST00000398587 UGT2B17O75795 530 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms