RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 METRNLQ641Q3 311 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 FAM83HQ6ZRV2 1179 aaPredicted RBP9.13□□□□□ -0.95
NEDD9-203ENST00000397378 APTXQ7Z2E3 356 aaKnown RBP9.13□□□□□ -0.95
NEDD9-203ENST00000397378 OR1L3Q8NH93 324 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 GDAP1Q8TB36 358 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 NR4A3Q92570 626 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 NRGNQ92686 78 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 TADA1Q96BN2 335 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 PPM1MQ96MI6 270 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 TTC25Q96NG3 672 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 C17orf62Q9BQA9 187 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 ZNF670Q9BS34 389 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 TLR10Q9BXR5 811 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 ZCCHC2Q9C0B9 1178 aaKnown RBP9.13□□□□□ -0.95
NEDD9-203ENST00000397378 EPS8L2Q9H6S3 715 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 KIR3DX1Q9H7L2 352 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 ATP13A2Q9NQ11 1180 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 DLL4Q9NR61 685 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 IMP3Q9NV31 184 aaKnown RBP9.13□□□□□ -0.95
NEDD9-203ENST00000397378 P4HTMQ9NXG6 502 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 AIPL1Q9NZN9 384 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 IP6K2Q9UHH9 426 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 SLC24A2Q9UI40 661 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 SERTAD3Q9UJW9 196 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 POMT2Q9UKY4 750 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 PSMD13Q9UNM6 376 aa9.13□□□□□ -0.95
NEDD9-203ENST00000397378 RPH3AQ9Y2J0 694 aaPredicted RBP9.13□□□□□ -0.95
NEDD9-203ENST00000397378 NCOA6Q14686 2063 aaPredicted RBP9.12□□□□□ -0.95
NEDD9-203ENST00000397378 KLHL33A6NCF5 533 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 SLC9B1P1A6NJY1 282 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 LRRC53A6NM62 1247 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 TMEM150CB9EJG8 249 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 KCNK1O00180 336 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 LCA5LO95447 670 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 SLC4A1P02730 911 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 CD63P08962 238 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 AGXTP21549 392 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 CDH3P22223 829 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 HMGCLP35914 325 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 CTSCP53634 463 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 GBE1Q04446 702 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 RBPJQ06330 500 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 PPIDQ08752 370 aaKnown RBP9.12□□□□□ -0.95
NEDD9-203ENST00000397378 SLC10A2Q12908 348 aaPredicted RBP9.12□□□□□ -0.95
NEDD9-203ENST00000397378 PRKAA1Q13131 559 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 XRCC4Q13426 336 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 PDK2Q15119 407 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 CEBPEQ15744 281 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 HADHQ16836 314 aaKnown RBP9.12□□□□□ -0.95
NEDD9-203ENST00000397378 LDLRAP1Q5SW96 308 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 IRAK1BP1Q5VVH5 260 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 ZDHHC20Q5W0Z9 365 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 TMEM198Q66K66 360 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 FBXO38Q6PIJ6 1188 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 BIVMQ86UB2 503 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 BEND7Q8N7W2 519 aaPredicted RBP9.12□□□□□ -0.95
NEDD9-203ENST00000397378 RASGEF1AQ8N9B8 481 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 CCNYQ8ND76 341 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 LRRN4Q8WUT4 740 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 NUDT8Q8WV74 236 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 FAF2Q96CS3 445 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 IMP4Q96G21 291 aaKnown RBP9.12□□□□□ -0.95
NEDD9-203ENST00000397378 C12orf66Q96MD2 445 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 INSM2Q96T92 566 aaPredicted RBP9.12□□□□□ -0.95
NEDD9-203ENST00000397378 SMR3AQ99954 134 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 ENKD1Q9H0I2 346 aa9.12□□□□□ -0.95
NEDD9-203ENST00000397378 CCM2LQ9NUG4 571 aaPredicted RBP9.12□□□□□ -0.95
NEDD9-203ENST00000397378 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.12□□□□□ -0.95
NEDD9-203ENST00000397378 PTRH2Q9Y3E5 179 aaKnown RBP9.12□□□□□ -0.95
NEDD9-203ENST00000397378 CFAP20Q9Y6A4 193 aaKnown RBP9.12□□□□□ -0.95
NEDD9-203ENST00000397378 E7EQ34 232 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 AURKAO14965 403 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 DDX3YO15523 660 aaKnown RBP9.11□□□□□ -0.95
NEDD9-203ENST00000397378 MAP3K7O43318 606 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 ZNF749O43361 778 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 NDST3O95803 873 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 POLR2CP19387 275 aaPredicted RBP9.11□□□□□ -0.95
NEDD9-203ENST00000397378 NDUFS1P28331 727 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 FOLR3P41439 243 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 PREPP48147 710 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 KLHL30Q0D2K2 578 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 ZBTB17Q13105 803 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 AIMP2Q13155 320 aaKnown RBP9.11□□□□□ -0.95
NEDD9-203ENST00000397378 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.11□□□□□ -0.95
NEDD9-203ENST00000397378 ZFYVE27Q5T4F4 411 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 AGAP7PQ5VUJ5 663 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 MLIPQ5VWP3 458 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 E4F1Q66K89 784 aaPredicted RBP9.11□□□□□ -0.95
NEDD9-203ENST00000397378 ZNF324BQ6AW86 544 aaPredicted RBP9.11□□□□□ -0.95
NEDD9-203ENST00000397378 CCDC70Q6NSX1 233 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 RPUSD3Q6P087 351 aaKnown RBP9.11□□□□□ -0.95
NEDD9-203ENST00000397378 TMEM220Q6QAJ8 160 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 IGFL2Q6UWQ7 119 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 B4GALNT4Q76KP1 1039 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 NT5DC3Q86UY8 548 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 MAP7D3Q8IWC1 876 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 PQLC3Q8N755 202 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 DDHD1Q8NEL9 900 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 CPLX3Q8WVH0 158 aa9.11□□□□□ -0.95
NEDD9-203ENST00000397378 BTBD6Q96KE9 485 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms