RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 TCAIMQ8N3R3 496 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 FAM110BQ8TC76 370 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 IRF7Q92985 503 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 CIB1Q99828 191 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 MRPS26Q9BYN8 205 aaKnown RBP16.46■□□□□ 0.22
NUP50-202ENST00000396096 IL23AQ9NPF7 189 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 C8orf4Q9NR00 106 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 SLCO3A1Q9UIG8 710 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 TMPRSS11EQ9UL52 423 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 PCDHGB4Q9UN71 923 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 EIF3LQ9Y262 564 aaKnown RBP16.46■□□□□ 0.22
NUP50-202ENST00000396096 PCDHGB5Q9Y5G0 923 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 DOCK6Q96HP0 2047 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 SMIM31A0A1B0GVY4 71 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 NEDD8-MDP1E9PL57 170 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 MANBAO00462 879 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 C8GP07360 202 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 MPC1LP0DKB6 136 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 ZNF30P17039 623 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 PSMC3P17980 439 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 FASP25445 335 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 PWP1Q13610 501 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 ELMSAN1Q6PJG2 1045 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 BRAT1Q6PJG6 821 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 GDPD4Q6W3E5 623 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 ZBTB49Q6ZSB9 765 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 RFLNAQ6ZTI6 216 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 OTOP2Q7RTS6 562 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 CARM1Q86X55 608 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 MFSD2AQ8NA29 543 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 CHST14Q8NCH0 376 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 TCEAL4Q96EI5 215 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 HBEGFQ99075 208 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 SPATA16Q9BXB7 569 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 BBS2Q9BXC9 721 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 SLC12A9Q9BXP2 914 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 TRIM8Q9BZR9 551 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 AURKCQ9UQB9 309 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 LZTS1Q9Y250 596 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 PCDHB3Q9Y5E6 796 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 ZFC3H1O60293 1989 aaKnown RBP16.45■□□□□ 0.22
NUP50-202ENST00000396096 PLXNA2O75051 1894 aa16.45■□□□□ 0.22
NUP50-202ENST00000396096 LOC730098B7Z3J9 87 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 BNIP3LO60238 219 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 ULK1O75385 1050 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 RSL1D1O76021 490 aaKnown RBP16.44■□□□□ 0.22
NUP50-202ENST00000396096 SLC2A4P14672 509 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 OXTRP30559 389 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 ERVFC1P60507 584 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 GK3PQ14409 553 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 TEAD2Q15562 447 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 GGTA1PQ4G0N0 100 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 ARHGAP15Q53QZ3 475 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 LRRC70Q7Z2Q7 622 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 ADIPOR2Q86V24 386 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 GLB1L3Q8NCI6 653 aaPredicted RBP16.44■□□□□ 0.22
NUP50-202ENST00000396096 OR8J3Q8NGG0 315 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 OR2A12Q8NGT7 310 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 NCSTNQ92542 709 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 CENPNQ96H22 339 aaPredicted RBP16.44■□□□□ 0.22
NUP50-202ENST00000396096 PAWRQ96IZ0 340 aaKnown RBP16.44■□□□□ 0.22
NUP50-202ENST00000396096 TMEM74Q96NL1 305 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 CGREF1Q99674 301 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 TCF25Q9BQ70 676 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 SLC32A1Q9H598 525 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 PIDD1Q9HB75 910 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 TLR9Q9NR96 1032 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 SPHK2Q9NRA0 654 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 TDP1Q9NUW8 608 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 DUS2Q9NX74 493 aaKnown RBP16.44■□□□□ 0.22
NUP50-202ENST00000396096 PKD2L2Q9NZM6 624 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 PDE10AQ9Y233 779 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 RNF11Q9Y3C5 154 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 TSPAN11A1L157 253 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 SLC16A5O15375 505 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 TCF3P15923 654 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 CKMT2P17540 419 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 PTPN2P17706 415 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 CASP2P42575 452 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 RPL5P46777 297 aaKnown RBP16.44■□□□□ 0.22
NUP50-202ENST00000396096 GNPDA1P46926 289 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 RPIAP49247 311 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 CCT8P50990 548 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 DCDC1P59894 354 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 RPL38P63173 70 aaKnown RBP16.44■□□□□ 0.22
NUP50-202ENST00000396096 SP140Q13342 867 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 APOFQ13790 326 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 NHSL2Q5HYW2 709 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 PLEKHS1Q5SXH7 462 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 Q6ZVU0 165 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 MRPL43Q8N983 215 aaKnown RBP16.44■□□□□ 0.22
NUP50-202ENST00000396096 ZBTB18Q99592 522 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 PARVBQ9HBI1 364 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 TBC1D14Q9P2M4 693 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 NFKBIL1Q9UBC1 381 aaPredicted RBP16.44■□□□□ 0.22
NUP50-202ENST00000396096 KLQ9UEF7 1012 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 MAGEL2Q9UJ55 1249 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 ANAPC2Q9UJX6 822 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 ZNF490Q9ULM2 529 aaPredicted RBP16.44■□□□□ 0.22
NUP50-202ENST00000396096 NEUROG3Q9Y4Z2 214 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms