RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SLITRK4Q8IW52 837 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 SLC22A15Q8IZD6 547 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 OR5AR1Q8NGP9 310 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 GIMAP7Q8NHV1 300 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 AARSD1Q9BTE6 412 aaKnown RBP19.42■□□□□ 0.7
SNCA-203ENST00000394986 PHACTR1Q9C0D0 580 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 CCDC68Q9H2F9 335 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 KIR3DX1Q9H7L2 352 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 SLC24A2Q9UI40 661 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 PSAT1Q9Y617 370 aa19.42■□□□□ 0.7
SNCA-203ENST00000394986 A0A1W2PNU3 283 aaPredicted RBP19.41■□□□□ 0.7
SNCA-203ENST00000394986 E5RI56 91 aa19.41■□□□□ 0.7
SNCA-203ENST00000394986 PROS1P07225 676 aa19.41■□□□□ 0.7
SNCA-203ENST00000394986 AMD1P17707 334 aa19.41■□□□□ 0.7
SNCA-203ENST00000394986 INHBCP55103 352 aa19.41■□□□□ 0.7
SNCA-203ENST00000394986 PLOD1Q02809 727 aaPredicted RBP19.41■□□□□ 0.7
SNCA-203ENST00000394986 PHF19Q5T6S3 580 aa19.41■□□□□ 0.7
SNCA-203ENST00000394986 CACTIN-AS1Q8N1I8 211 aa19.41■□□□□ 0.7
SNCA-203ENST00000394986 SIDT2Q8NBJ9 832 aaKnown RBP19.41■□□□□ 0.7
SNCA-203ENST00000394986 CFAP61Q8NHU2 1237 aa19.41■□□□□ 0.7
SNCA-203ENST00000394986 ZFATQ9P243 1243 aa19.41■□□□□ 0.7
SNCA-203ENST00000394986 KLHL3Q9UH77 587 aa19.41■□□□□ 0.7
SNCA-203ENST00000394986 RUVBL2Q9Y230 463 aaKnown RBP19.41■□□□□ 0.7
SNCA-203ENST00000394986 ASF1AQ9Y294 204 aa19.41■□□□□ 0.7
SNCA-203ENST00000394986 HEBP2Q9Y5Z4 205 aa19.41■□□□□ 0.7
SNCA-203ENST00000394986 PIKFYVEQ9Y2I7 2098 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 SLCO2B1O94956 709 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 DEKP35659 375 aaKnown RBP19.4■□□□□ 0.7
SNCA-203ENST00000394986 CLCN7P51798 805 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 GFERP55789 205 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 ZFP36L1Q07352 338 aaKnown RBP19.4■□□□□ 0.7
SNCA-203ENST00000394986 ABRQ12979 859 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 SNAP47Q5SQN1 464 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 UBAP2Q5T6F2 1119 aaKnown RBP19.4■□□□□ 0.7
SNCA-203ENST00000394986 KIAA0408Q6ZU52 694 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 ZBTB2Q8N680 514 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 RCBTB1Q8NDN9 531 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 GABPB2Q8TAK5 448 aaPredicted RBP19.4■□□□□ 0.7
SNCA-203ENST00000394986 KCNJ9Q92806 393 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 GATA6Q92908 595 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 CCDC74BQ96LY2 380 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 TMEM121BQ9BXQ6 578 aaPredicted RBP19.4■□□□□ 0.7
SNCA-203ENST00000394986 LRRC4CQ9HCJ2 640 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 COLEC10Q9Y6Z7 277 aa19.4■□□□□ 0.7
SNCA-203ENST00000394986 IGHV5-10-1A0A0J9YXX1 117 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 TCRBV9S1A1TA0A576 114 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 TRABD2BA6NFA1 517 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 CXorf49A8MYA2 514 aaPredicted RBP19.39■□□□□ 0.69
SNCA-203ENST00000394986 NDUFS1P28331 727 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 CAPZBP47756 277 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 PGGT1BP53609 377 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 PPP1CAP62136 330 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 SQSTM1Q13501 440 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 CUL1Q13616 776 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 ACSBG2Q5FVE4 666 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 PLEKHS1Q5SXH7 462 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 TEX35Q5T0J7 233 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 C3orf62Q6ZUJ4 267 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 OR52E1Q8NGJ3 308 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 SKA2Q8WVK7 121 aaPredicted RBP19.39■□□□□ 0.69
SNCA-203ENST00000394986 TMEM74Q96NL1 305 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 GPR21Q99679 349 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 XKR8Q9H6D3 395 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 MTRF1LQ9UGC7 380 aaKnown RBP19.39■□□□□ 0.69
SNCA-203ENST00000394986 CIDEBQ9UHD4 219 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 PLAGL1Q9UM63 463 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 NFS1Q9Y697 457 aa19.39■□□□□ 0.69
SNCA-203ENST00000394986 C1QTNF9BB2RNN3 333 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 KPNA5O15131 536 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 C1QAP02745 245 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 MPOP05164 745 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 C1QTNF9P0C862 333 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 THRAP10827 490 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 HGFP14210 728 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 CCKBRP32239 447 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 LIMK2P53671 638 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 CDKN2DP55273 166 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 TIAL1Q01085 375 aaKnown RBP eCLIP19.38■□□□□ 0.69
SNCA-203ENST00000394986 GBX1Q14549 363 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 C16orf72Q14CZ0 275 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 C3orf38Q5JPI3 329 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 TMEM71Q6P5X7 295 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 FOXR1Q6PIV2 292 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 STRA8Q7Z7C7 330 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 GALNT7Q86SF2 657 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 ACVR1CQ8NER5 493 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 OR4E2Q8NGC2 313 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 OR4D9Q8NGE8 314 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 CD200R1Q8TD46 325 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 MVB12BQ9H7P6 319 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 SATB2Q9UPW6 733 aa19.38■□□□□ 0.69
SNCA-203ENST00000394986 TDRKHQ9Y2W6 561 aaKnown RBP19.38■□□□□ 0.69
SNCA-203ENST00000394986 OR6C74A6NCV1 312 aa19.37■□□□□ 0.69
SNCA-203ENST00000394986 A8MU76 341 aa19.37■□□□□ 0.69
SNCA-203ENST00000394986 CLPPQ16740 277 aaPredicted RBP19.37■□□□□ 0.69
SNCA-203ENST00000394986 WDR74Q6RFH5 385 aaPredicted RBP19.37■□□□□ 0.69
SNCA-203ENST00000394986 GPATCH11Q8N954 259 aa19.37■□□□□ 0.69
SNCA-203ENST00000394986 OR5K2Q8NHB8 316 aa19.37■□□□□ 0.69
SNCA-203ENST00000394986 ZFPM2Q8WW38 1151 aa19.37■□□□□ 0.69
SNCA-203ENST00000394986 LCN9Q8WX39 176 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms