RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 PIP4K2CQ8TBX8 421 aa13.77□□□□□ -0.2
PPP3CA-202ENST00000394853 ZNF385DQ9H6B1 395 aa13.77□□□□□ -0.2
PPP3CA-202ENST00000394853 DNAAF2Q9NVR5 837 aaKnown RBP13.77□□□□□ -0.2
PPP3CA-202ENST00000394853 NMRK1Q9NWW6 199 aa13.77□□□□□ -0.2
PPP3CA-202ENST00000394853 ADAMTS6Q9UKP5 1117 aa13.77□□□□□ -0.2
PPP3CA-202ENST00000394853 HS3ST2Q9Y278 367 aa13.77□□□□□ -0.2
PPP3CA-202ENST00000394853 KRT87PA6NCN2 255 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 ACRV1P26436 265 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 LRP8Q14114 963 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 CDKN3Q16667 212 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 LRRC74BQ6ZQY2 392 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 PELI3Q8N2H9 469 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 CPSF7Q8N684 471 aaKnown RBP13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 C1orf50Q9BV19 199 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 SLC2A11Q9BYW1 496 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 PAIP2BQ9ULR5 123 aaKnown RBP13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 DOLKQ9UPQ8 538 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 DHRS7Q9Y394 339 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 SOX11P35716 441 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 HSPA7P48741 367 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 LRIT3Q3SXY7 679 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 ZNF648Q5T619 568 aaPredicted RBP13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 BNC2Q6ZN30 1099 aaPredicted RBP13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 OR2A12Q8NGT7 310 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 FAM3CQ92520 227 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 SCRN2Q96FV2 425 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 LMLNQ96KR4 655 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 PHF7Q9BWX1 381 aaPredicted RBP13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 MRPL1Q9BYD6 325 aaKnown RBP13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 NOL11Q9H8H0 719 aaKnown RBP13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 PKD2L2Q9NZM6 624 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 ZNF225Q9UK10 706 aa13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 SPTBN5Q9NRC6 3674 aaKnown RBP13.77□□□□□ -0.21
PPP3CA-202ENST00000394853 S100BP04271 92 aaPredicted RBP13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 PCNAP12004 261 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 ANPEPP15144 967 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 XRCC1P18887 633 aaPredicted RBP13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 PRDX6P30041 224 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 GPR1P46091 355 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 DIO3P55073 304 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 STX1BP61266 288 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 AP2B1P63010 937 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 HSPA14Q0VDF9 509 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 CCNIQ14094 377 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 PHKG1Q16816 387 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 SYTL3Q4VX76 610 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 CERS6Q6ZMG9 384 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 LARP4Q71RC2 724 aaKnown RBP eCLIP13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 TTYH1Q9H313 450 aaPredicted RBP13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 FBXL12Q9NXK8 326 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 STX18Q9P2W9 335 aaKnown RBP13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 ARPC4-TTLL3A0A0A6YYG9 625 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 NR5A2O00482 541 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 NDUFS2O75306 463 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 ARPC4P59998 168 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 RALGDSQ12967 914 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 C16orf89Q6UX73 402 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 VOPP1Q96AW1 172 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 KCTD5Q9NXV2 234 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 GNPTGQ9UJJ9 305 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 PCTPQ9UKL6 214 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 SCAMP1O15126 338 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 NVLO15381 856 aaKnown RBP13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 CCNT2O60583 730 aaKnown RBP13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 PENKP01210 267 aaPredicted RBP13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 PXNP49023 591 aaPredicted RBP13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 GALNT1Q10472 559 aaPredicted RBP13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 CEACAM7Q14002 265 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 ZNF77Q15935 545 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 PGM2L1Q6PCE3 622 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 TTC23LQ6PF05 361 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 NXPE1Q8N323 547 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 NELL1Q92832 810 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 SHDQ96IW2 340 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 TRIM8Q9BZR9 551 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 IL36AQ9UHA7 158 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 POLG2Q9UHN1 485 aa13.76□□□□□ -0.21
PPP3CA-202ENST00000394853 DENND4CQ5VZ89 1909 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 MSH3P20585 1137 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 CASP2P42575 452 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 BOP1Q14137 746 aaKnown RBP13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 TRAPPC5Q8IUR0 188 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 NDE1Q9NXR1 346 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 INVSQ9Y283 1065 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 PCDHB1Q9Y5F3 818 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 ANTXRLA6NF34 631 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 PLK4O00444 970 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 VHLP40337 213 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 MTTPP55157 894 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 SQLEQ14534 574 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 VPS26BQ4G0F5 336 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 PPP4R4Q6NUP7 873 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 SLC30A9Q6PML9 568 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 Q6ZVL8 140 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 TRMT11Q7Z4G4 463 aaKnown RBP13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 C12orf40Q86WS4 652 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 DNAJC9Q8WXX5 260 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 DLG3Q92796 817 aa13.75□□□□□ -0.21
PPP3CA-202ENST00000394853 POLMQ9NP87 494 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms