RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 RGS5O15539 181 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 POU1F1P28069 291 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 KRT20P35900 424 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 MAGEA11P43364 429 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 DET1Q7L5Y6 550 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 ZNF605Q86T29 641 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 GPR150Q8NGU9 434 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 MED8Q96G25 268 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 SHROOM3Q8TF72 1996 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 A0A0D9SEW6 157 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 M0QZQ0 153 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 ZNF865P0CJ78 1059 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 IFNA8P32881 189 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 CHI3L1P36222 383 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 HPCAL1P37235 193 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 RCAN2Q14206 197 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 KCNA10Q16322 511 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 SPDYE7PQ495Y7 208 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 PAGE3Q5JUK9 113 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 ERICH5Q6P6B1 374 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 UBE2R2Q712K3 238 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 ZFAND4Q86XD8 727 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 MCFD2Q8NI22 146 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 HDAC2Q92769 488 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 FUBP1Q96AE4 644 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 SMURF2Q9HAU4 748 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 ABCB10Q9NRK6 738 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 PDP1Q9P0J1 537 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 GMPR2Q9P2T1 348 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 SLC25A13Q9UJS0 675 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 PCTPQ9UKL6 214 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 COL11A1P12107 1806 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 LOC100506127A0A0U1RQW1 187 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 PNMA8CA0A1B0GUJ8 204 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 FOXD2O60548 495 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 MYCP01106 439 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 HOXD8P13378 290 aaPredicted RBP11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 AP1S1P61966 158 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 ZNF284Q2VY69 593 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 TRIM60Q495X7 471 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 FUT10Q6P4F1 479 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 OR8J3Q8NGG0 315 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 ITFG2Q969R8 447 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 TMEM159Q96B96 161 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 ATOH8Q96SQ7 321 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 PCDH12Q9NPG4 1184 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 RASSF1Q9NS23 344 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 SLC38A8A6NNN8 435 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 IQCF5A8MTL0 148 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 SH3BGRLO75368 114 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 PGRP06401 933 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 ALOX12P18054 663 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 OR1D2P34982 312 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 ALDH3B2P48448 385 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 RPIAP49247 311 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 RING1Q06587 406 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 IRF5Q13568 498 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 MEP1AQ16819 746 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 SLC36A3Q495N2 470 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 SPANXN4Q5MJ08 99 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 MYDGFQ969H8 173 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 MAGEB10Q96LZ2 347 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 ENOPH1Q9UHY7 261 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 EVLQ9UI08 416 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 RIMKLBQ9ULI2 386 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 TMCC3Q9ULS5 477 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 MAPRE3Q9UPY8 281 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 GPR45Q9Y5Y3 372 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 TFPTP0C1Z6 253 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 PRSS56P0CW18 603 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 PCSK6P29122 969 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 HOXC13P31276 330 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 SPAM1P38567 509 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 LAPTM5Q13571 262 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 NHSL2Q5HYW2 709 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 SPANXN2Q5MJ10 180 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 SERINC5Q86VE9 423 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 FUNDC1Q8IVP5 155 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 ZC3H7AQ8IWR0 971 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 TCAIMQ8N3R3 496 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 BBS2Q9BXC9 721 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 NPLQ9BXD5 320 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 NSUN3Q9H649 340 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 ZNF385DQ9H6B1 395 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 SARDHQ9UL12 918 aa11.46□□□□□ -0.57
UBE2D3-209ENST00000394804 LOC100130705A0A1B0GUX0 176 aa11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 PLOD2O00469 737 aa11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 UBFD1O14562 309 aaKnown RBP11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 TOR1BO14657 336 aa11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 OR1I1O60431 355 aa11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 FABP3P05413 133 aa11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 RPS17P08708 135 aaKnown RBP11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 DBTP11182 482 aaKnown RBP11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 PCSK2P16519 638 aa11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 RRM2P31350 389 aa11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 SNRPD1P62314 119 aaKnown RBP11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 KCNAB2Q13303 367 aa11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 PAGE2Q7Z2X7 111 aa11.46□□□□□ -0.58
UBE2D3-209ENST00000394804 PLD4Q96BZ4 506 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms