RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ZNF30P17039 623 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 TSPAN8P19075 237 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 MMP12P39900 470 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 RPL5P46777 297 aaKnown RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 ACADVLP49748 655 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 B4GALNT1Q00973 533 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 CDC16Q13042 620 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 HTR4Q13639 388 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 SPIDRQ14159 915 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 C2orf27AQ580R0 203 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 ARSJQ5FYB0 599 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 ZNF648Q5T619 568 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 GPRC6AQ5T6X5 926 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 LYPLAL1Q5VWZ2 237 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 FAM219BQ5XKK7 198 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 IZUMO2Q6UXV1 221 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 LIPIQ6XZB0 460 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 MTSS1LQ765P7 747 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 DPPA4Q7L190 304 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 PIWIL4Q7Z3Z4 852 aaKnown RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 MAVSQ7Z434 540 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 CD163Q86VB7 1156 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 SPATA24Q86W54 205 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 PDSS2Q86YH6 399 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 WDR75Q8IWA0 830 aaKnown RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 SCUBE1Q8IWY4 988 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 KBTBD2Q8IY47 623 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 LSMEM2Q8N112 164 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 NKAPQ8N5F7 415 aaKnown RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 KDM1BQ8NB78 822 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 TMIEQ8NEW7 156 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 CSGALNACT1Q8TDX6 532 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 KIAA1191Q96A73 305 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 PRR11Q96HE9 360 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 RILPQ96NA2 401 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 COPS8Q99627 209 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 P2RY13Q9BPV8 354 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 C19orf43Q9BQ61 176 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 DERL2Q9GZP9 239 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 ILKAPQ9H0C8 392 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 TFB2MQ9H5Q4 396 aaKnown RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 UTP6Q9NYH9 597 aaKnown RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 CD207Q9UJ71 328 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 GNPTGQ9UJJ9 305 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 BLOC1S6Q9UL45 172 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 RNF112Q9ULX5 631 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 WDR37Q9Y2I8 494 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 DHRS7Q9Y394 339 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 STON1Q9Y6Q2 735 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 A0A1B0GVG6 124 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 ARHGAP10A1A4S6 786 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 FADS2P1A8MWK0 482 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 TMEM233B4DJY2 109 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 SUPT3HB4E1H0 165 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 ANHXE9PGG2 379 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 K7EQS6 105 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 KHNYNO15037 678 aaKnown RBP6.82□□□□□ -1.32
RTN4-205ENST00000394609 INPP4BO15327 924 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 MMP20O60882 483 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 H2AFYO75367 372 aaKnown RBP6.82□□□□□ -1.32
RTN4-205ENST00000394609 SUPT3HO75486 399 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 SUPT7LO94864 414 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 SIX3O95343 332 aaPredicted RBP6.82□□□□□ -1.32
RTN4-205ENST00000394609 ADRB3P13945 408 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 MTHFD2P13995 350 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 GFAPP14136 432 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 RPS3P23396 243 aaKnown RBP eCLIP6.82□□□□□ -1.323e-15■□□□□ 9.2
RTN4-205ENST00000394609 NFKBIAP25963 317 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 ITGB7P26010 798 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 AKT1P31749 480 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 EIF2DP41214 584 aaKnown RBP6.82□□□□□ -1.32
RTN4-205ENST00000394609 NSG1P42857 185 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 CDH13P55290 713 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 SESN3P58005 492 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 DNAJB13P59910 316 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 ATP6V0D1P61421 351 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 CYLC2Q14093 348 aaPredicted RBP6.82□□□□□ -1.32
RTN4-205ENST00000394609 SAMD5Q5TGI4 173 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 ZDHHC20Q5W0Z9 365 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 UGT3A1Q6NUS8 523 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 B3GNT6Q6ZMB0 384 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 TECPR1Q7Z6L1 1165 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 CROCCP3Q8IVE0 287 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 PELI3Q8N2H9 469 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 Q8N3U1 123 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 ZNF513Q8N8E2 541 aaPredicted RBP6.82□□□□□ -1.32
RTN4-205ENST00000394609 PTGR2Q8N8N7 351 aaPredicted RBP6.82□□□□□ -1.32
RTN4-205ENST00000394609 PLPP7Q8NBV4 271 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 STAG3L4Q8TBR4 150 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 HCAR2Q8TDS4 363 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 NUP210Q8TEM1 1887 aaPredicted RBP6.82□□□□□ -1.32
RTN4-205ENST00000394609 WDR60Q8WVS4 1066 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 FUBP1Q96AE4 644 aaKnown RBP6.82□□□□□ -1.32
RTN4-205ENST00000394609 NECTIN4Q96NY8 510 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 ATOH8Q96SQ7 321 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 WWP1Q9H0M0 922 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 Q9H521 79 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 COG4Q9H9E3 785 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 PREBQ9HCU5 417 aa6.82□□□□□ -1.32
RTN4-205ENST00000394609 DYRK4Q9NR20 520 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms