RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 RAP2CQ9Y3L5 183 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 PCDHGC4Q9Y5F7 938 aa5.61□□□□□ -1.51
RFFL-202ENST00000394597 A0A1W2PQ67 120 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 NCF1BA6NI72 391 aaPredicted RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 NCF1CA8MVU1 366 aaPredicted RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 SLC22A1O15245 554 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 AP1G1O43747 822 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 BCAS2O75934 225 aaPredicted RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 NFATC1O95644 943 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 NCF1P14598 390 aaPredicted RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 ITGB6P18564 788 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 IGFBP4P22692 258 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 ACVRL1P37023 503 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 IL2P60568 153 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 CD83Q01151 205 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 GAD2Q05329 585 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 FRG1Q14331 258 aaKnown RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 STARD3Q14849 445 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 ACOX1Q15067 660 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 FXNQ16595 210 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 PUS10Q3MIT2 529 aaKnown RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 FAM182AQ5T1J6 154 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 TRMT10BQ6PF06 316 aaKnown RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 PLET1Q6UQ28 207 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 CYP20A1Q6UW02 462 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 SPESP1Q6UW49 350 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 GALNT7Q86SF2 657 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 FAM20CQ8IXL6 584 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 OR8H3Q8N146 312 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 UMODL1-AS1Q8N2C9 162 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 MPP5Q8N3R9 675 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 ZNF276Q8N554 614 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 TTC9BQ8N6N2 239 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 ZNF781Q8N8C0 355 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 OR4K2Q8NGD2 314 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 CDC26Q8NHZ8 85 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 GRIN3AQ8TCU5 1115 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 BRSK1Q8TDC3 778 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 ASB12Q8WXK4 309 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 ING5Q8WYH8 240 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 MYO19Q96H55 970 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 THUMPD3Q9BV44 507 aaKnown RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 CFHR5Q9BXR6 569 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 RIBC2Q9H4K1 309 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 RIC8BQ9NVN3 520 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 DUS2Q9NX74 493 aaKnown RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 EMC3Q9P0I2 261 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 DEC1Q9P2X7 70 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 CNOT6Q9ULM6 557 aaKnown RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 BAIAP2Q9UQB8 552 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 PDE10AQ9Y233 779 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 FAM50BQ9Y247 325 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 CYP7B1O75881 506 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 OR7A10O76100 309 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 C2P06681 752 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 CTSAP10619 480 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 IL4RP24394 825 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 MPSTP25325 297 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 HOXC8P31273 242 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 BMPR1AP36894 532 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 EMP3P54852 163 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 DEFB103AP81534 67 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 RHDQ02161 417 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 PUDPQ08623 228 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 ACAP2Q15057 778 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 TAB1Q15750 504 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 PTPRNQ16849 979 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 ALFQ53S48 1182 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 TRNP1Q6NT89 227 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 SNX29P2Q8IUI4 249 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 CADM3Q8N126 398 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 EID3Q8N140 333 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 CADM2Q8N3J6 435 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 FBXO39Q8N4B4 442 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 CNTD1Q8N815 330 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 OR6K2Q8NGY2 324 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 ATL1Q8WXF7 558 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 JPH3Q8WXH2 748 aaPredicted RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 ASB9Q96DX5 294 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 MSANTD3Q96H12 275 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 PPP1R16AQ96I34 528 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 FEM1CQ96JP0 617 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 SIGLEC10Q96LC7 697 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 SAMD11Q96NU1 681 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 RBBP8Q99708 897 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 ZFYVE1Q9HBF4 777 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 ACSS2Q9NR19 701 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 ARMC1Q9NVT9 282 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 QPCTLQ9NXS2 382 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 C3orf18Q9UK00 162 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 OAZ3Q9UMX2 235 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 B3GNT3Q9Y2A9 372 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 WDR90Q96KV7 1748 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 KDELR3O43731 214 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 PLIN3O60664 434 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 PCDH8O95206 1070 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 POP4O95707 220 aaKnown RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 C4BPBP20851 252 aa5.6□□□□□ -1.51
RFFL-202ENST00000394597 AZGP1P25311 298 aaKnown RBP5.6□□□□□ -1.51
RFFL-202ENST00000394597 MC4RP32245 332 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms