RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 OLFM1Q99784 485 aa8.97□□□□□ -0.97
CDH11-202ENST00000394156 FBRSL1Q9HCM7 1045 aaKnown RBP8.97□□□□□ -0.97
CDH11-202ENST00000394156 ZNF624Q9P2J8 865 aaPredicted RBP8.97□□□□□ -0.97
CDH11-202ENST00000394156 MYO7AQ13402 2215 aa8.97□□□□□ -0.97
CDH11-202ENST00000394156 COL4A1P02462 1669 aa8.97□□□□□ -0.97
CDH11-202ENST00000394156 SLC25A12O75746 678 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 IDO1P14902 403 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 EPCAMP16422 314 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 FMO3P31513 532 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 SRP54P61011 504 aaKnown RBP8.96□□□□□ -0.97
CDH11-202ENST00000394156 BTN3A2P78410 334 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 PCDH1Q08174 1060 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 PTCHD4Q6ZW05 846 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 IQCHQ86VS3 1027 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 CEP97Q8IW35 865 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 CEP295NLQ96MC4 621 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 DENND2DQ9H6A0 471 aaPredicted RBP8.96□□□□□ -0.97
CDH11-202ENST00000394156 NKX1-2Q9UD57 310 aaPredicted RBP8.96□□□□□ -0.97
CDH11-202ENST00000394156 GPN3Q9UHW5 284 aaPredicted RBP8.96□□□□□ -0.97
CDH11-202ENST00000394156 CARNS1A5YM72 827 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 RHPN2P1A8MT19 583 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 LOC730098B7Z3J9 87 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 MYL12AP19105 171 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 EN2P19622 333 aaPredicted RBP8.96□□□□□ -0.97
CDH11-202ENST00000394156 PHF19Q5T6S3 580 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 C8orf59Q8N0T1 100 aaPredicted RBP8.96□□□□□ -0.97
CDH11-202ENST00000394156 CPSF7Q8N684 471 aaKnown RBP8.96□□□□□ -0.97
CDH11-202ENST00000394156 LMX1AQ8TE12 382 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 KBTBD7Q8WVZ9 684 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 RORBQ92753 470 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 CLP1Q92989 425 aaKnown RBP8.96□□□□□ -0.97
CDH11-202ENST00000394156 PRR11Q96HE9 360 aaPredicted RBP8.96□□□□□ -0.97
CDH11-202ENST00000394156 KCNC2Q96PR1 638 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 PLEKHG4BQ96PX9 1271 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 C9orf16Q9BUW7 83 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 ADAM7Q9H2U9 754 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 POLR1BQ9H9Y6 1135 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 DEAF1O75398 565 aaPredicted RBP8.96□□□□□ -0.97
CDH11-202ENST00000394156 BCL10O95999 233 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 IFNA14P01570 189 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 ARSAP15289 507 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 AQP4P55087 323 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 PDE12Q6L8Q7 609 aaKnown RBP8.96□□□□□ -0.97
CDH11-202ENST00000394156 MS4A4AQ96JQ5 239 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 TPSD1Q9BZJ3 242 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 AMBNQ9NP70 447 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 ABCB9Q9NP78 766 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 MRPS30Q9NP92 439 aaKnown RBP8.96□□□□□ -0.97
CDH11-202ENST00000394156 TEX264Q9Y6I9 313 aa8.96□□□□□ -0.97
CDH11-202ENST00000394156 ANKRD66B4E2M5 251 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 TRAFD1O14545 582 aaPredicted RBP8.96□□□□□ -0.98
CDH11-202ENST00000394156 TOR1BO14657 336 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 HIST1H2ABP04908 130 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 HNF1BP35680 557 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 CDKN2DP55273 166 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 TNK2Q07912 1038 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 HIST3H2AQ7L7L0 130 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 ARCQ7LC44 396 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 RP9Q8TA86 221 aaKnown RBP8.96□□□□□ -0.98
CDH11-202ENST00000394156 HIST1H2ACQ93077 130 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 IL17FQ96PD4 163 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 TRIT1Q9H3H1 467 aaKnown RBP8.96□□□□□ -0.98
CDH11-202ENST00000394156 GIN1Q9NXP7 522 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 TBC1D14Q9P2M4 693 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 VPS51Q9UID3 782 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 AP4B1Q9Y6B7 739 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 PIGRP01833 764 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 CA3P07451 260 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 ACTR1BP42025 376 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 ACTR1AP61163 376 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 LRRC32Q14392 662 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 FAM47BQ8NA70 645 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 PIK3C3Q8NEB9 887 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 CADM1Q9BY67 442 aaKnown RBP8.96□□□□□ -0.98
CDH11-202ENST00000394156 CCDC177Q9NQR7 707 aaPredicted RBP8.96□□□□□ -0.98
CDH11-202ENST00000394156 PHPT1Q9NRX4 125 aaPredicted RBP8.96□□□□□ -0.98
CDH11-202ENST00000394156 MARCH4Q9P2E8 410 aaPredicted RBP8.96□□□□□ -0.98
CDH11-202ENST00000394156 SLCO3A1Q9UIG8 710 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 NHSL1Q5SYE7 1610 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 A0A075B6Q4 140 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 TEX28O15482 410 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 TCF3P15923 654 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 MYBPC1Q00872 1141 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 COX10Q12887 443 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 NNATQ16517 81 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 ODF4Q2M2E3 257 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 CHSY3Q70JA7 882 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 ADHFE1Q8IWW8 467 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 NIPA2Q8N8Q9 360 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 RNFT2Q96EX2 444 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 GORASP1Q9BQQ3 440 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 OR51B5Q9H339 312 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 SEMA3GQ9NS98 782 aa8.96□□□□□ -0.98
CDH11-202ENST00000394156 TCRBV21S2A2A0A5A6 115 aa8.95□□□□□ -0.98
CDH11-202ENST00000394156 ADAM12O43184 909 aa8.95□□□□□ -0.98
CDH11-202ENST00000394156 SAGP10523 405 aaPredicted RBP8.95□□□□□ -0.98
CDH11-202ENST00000394156 ST13P50502 369 aaKnown RBP8.95□□□□□ -0.98
CDH11-202ENST00000394156 C1QTNF8P60827 252 aa8.95□□□□□ -0.98
CDH11-202ENST00000394156 SLBPQ14493 270 aaKnown RBP eCLIP8.95□□□□□ -0.98
CDH11-202ENST00000394156 MYLK3Q32MK0 819 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms