RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 FBXO25Q8TCJ0 367 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 CCDC86Q9H6F5 360 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 POLR1BQ9H9Y6 1135 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 PLAC1Q9HBJ0 212 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 OGFRQ9NZT2 677 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 PDP2Q9P2J9 529 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 SLC24A2Q9UI40 661 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 ASF1AQ9Y294 204 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 COMMD10Q9Y6G5 202 aa18.52■□□□□ 0.56
PDLIM7-204ENST00000393546 AKAP13Q12802 2813 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 NIPSNAP2O75323 286 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 SLCO2B1O94956 709 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 MPOP05164 745 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 GABREP78334 506 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 MPP1Q00013 466 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 CYP4F3Q08477 520 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 C3orf38Q5JPI3 329 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 SNAP47Q5SQN1 464 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 TEDDM1Q5T9Z0 273 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 FOXR1Q6PIV2 292 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 ZDHHC24Q6UX98 284 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 KIAA0408Q6ZU52 694 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 CNTN4Q8IWV2 1026 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 LSMEM2Q8N112 164 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 FBXO39Q8N4B4 442 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 JPH3Q8WXH2 748 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 SEC14L1Q92503 715 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 ZDHHC12Q96GR4 267 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 CCDC74BQ96LY2 380 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 CMKLR1Q99788 373 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 PHACTR1Q9C0D0 580 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 TRIT1Q9H3H1 467 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 LATS2Q9NRM7 1088 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 FAM114A2Q9NRY5 505 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 TMEM9Q9P0T7 183 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 POLG2Q9UHN1 485 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 SATB2Q9UPW6 733 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 CDYLQ9Y232 598 aa18.51■□□□□ 0.55
PDLIM7-204ENST00000393546 KIF26BQ2KJY2 2108 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 ESYT3A0FGR9 886 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 TMEM8BA6NDV4 472 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 HGSO14964 777 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 F7P08709 466 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 THRAP10827 490 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 MGAT5Q09328 741 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 ABRQ12979 859 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 PRKG2Q13237 762 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 TRMT10BQ6PF06 316 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 CNSTQ6PJW8 725 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 CCDC25Q86WR0 208 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 VRK3Q8IV63 474 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 TBC1D21Q8IYX1 336 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 LCN9Q8WX39 176 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 RSC1A1Q92681 617 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 CNTNAP3BQ96NU0 1288 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 CNTNAP3Q9BZ76 1288 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 RAB33BQ9H082 229 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 EPHA6Q9UF33 1036 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 PCDHGA8Q9Y5G5 932 aa18.5■□□□□ 0.55
PDLIM7-204ENST00000393546 TPRP12270 2363 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 CHD8Q9HCK8 2581 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 A8MU76 341 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 PLD2O14939 933 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 CAPN5O15484 640 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 AHSGP02765 367 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 RPN2P04844 631 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 RBMS1P29558 406 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 CSTF2P33240 577 aaKnown RBP eCLIP18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 CAPZBP47756 277 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 ARMC6Q6NXE6 501 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 ZNF549Q6P9A3 640 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 GALNT7Q86SF2 657 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 ZBTB2Q8N680 514 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 RCBTB1Q8NDN9 531 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 OR4E2Q8NGC2 313 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 OR5AR1Q8NGP9 310 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 OR5K2Q8NHB8 316 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 CFAP61Q8NHU2 1237 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 MDM1Q8TC05 714 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 SKA2Q8WVK7 121 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 FAM136AQ96C01 138 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 TGM7Q96PF1 710 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 AARSD1Q9BTE6 412 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 TFB2MQ9H5Q4 396 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 HRASLS2Q9NWW9 162 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 MOCS1Q9NZB8 636 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 ZFATQ9P243 1243 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 KLHL42Q9P2K6 505 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 DKK4Q9UBT3 224 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 KLHL3Q9UH77 587 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 DMGDHQ9UI17 866 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 LOXL2Q9Y4K0 774 aa18.49■□□□□ 0.55
PDLIM7-204ENST00000393546 A0A1W2PNU3 283 aaPredicted RBP18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 OR6C74A6NCV1 312 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 AGRPO00253 132 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 KDM1AO60341 852 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 BRINP1O60477 761 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 C9P02748 559 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 JMJD7P0C870 316 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 MAGEA4P43358 317 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms