RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 AMER3Q8N944 861 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 MDGA1Q8NFP4 955 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 ZNF671Q8TAW3 534 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 GPT2Q8TD30 523 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 ACTRT2Q8TDY3 377 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 OTUB1Q96FW1 271 aaPredicted RBP6.3□□□□□ -1.4
TRAV35-201ENST00000390462 ZC3HAV1LQ96H79 300 aaKnown RBP6.3□□□□□ -1.4
TRAV35-201ENST00000390462 SLC41A2Q96JW4 573 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 CCT7Q99832 543 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 FAM110AQ9BQ89 295 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 C12orf65Q9H3J6 166 aaKnown RBP6.3□□□□□ -1.4
TRAV35-201ENST00000390462 TCF7L2Q9NQB0 619 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.3□□□□□ -1.4
TRAV35-201ENST00000390462 ZNHIT6Q9NWK9 470 aaKnown RBP6.3□□□□□ -1.4
TRAV35-201ENST00000390462 SIRT5Q9NXA8 310 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 BAIAP2L1Q9UHR4 511 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 FBXO4Q9UKT5 387 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 AMFRQ9UKV5 643 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 SPACA6W5XKT8 324 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 LMTK2Q8IWU2 1503 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 MROH5Q6ZUA9 1318 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 NRXN3Q9Y4C0 1643 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 CHD4Q14839 1912 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 C15orf38-AP3S2A0A0A6YYH1 394 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 TYW5A2RUC4 315 aaKnown RBP6.29□□□□□ -1.4
TRAV35-201ENST00000390462 HSPB2A8KAH6 182 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 HS3ST1O14792 307 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 PAHP00439 452 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 CXCL10P02778 98 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 IL6RP08887 468 aaPredicted RBP6.29□□□□□ -1.4
TRAV35-201ENST00000390462 EPB41P11171 864 aaKnown RBP6.29□□□□□ -1.4
TRAV35-201ENST00000390462 PPP3CBP16298 524 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 NOS1P29475 1434 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 PKLRP30613 574 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 ZNF84P51523 738 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 FOLH1Q04609 750 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 NAE1Q13564 534 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 HSPB2Q16082 182 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 PLK5Q496M5 336 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 LBHQ53QV2 105 aaPredicted RBP6.29□□□□□ -1.4
TRAV35-201ENST00000390462 TBC1D9BQ66K14 1250 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 PAPD4Q6PIY7 484 aaKnown RBP6.29□□□□□ -1.4
TRAV35-201ENST00000390462 ENPP7Q6UWV6 458 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 IGFN1Q86VF2 1251 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 AQP12AQ8IXF9 295 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 C16orf71Q8IYS4 520 aaPredicted RBP6.29□□□□□ -1.4
TRAV35-201ENST00000390462 LRRC43Q8N309 656 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 TMEM217Q8N7C4 229 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 EXD1Q8NHP7 514 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 BBS10Q8TAM1 723 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 FEZF2Q8TBJ5 459 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 SLC20A1Q8WUM9 679 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 LPIN2Q92539 896 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 PTPRUQ92729 1446 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 PIWIL1Q96J94 861 aaKnown RBP6.29□□□□□ -1.4
TRAV35-201ENST00000390462 SMC6Q96SB8 1091 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 CDK5RAP1Q96SZ6 601 aaKnown RBP6.29□□□□□ -1.4
TRAV35-201ENST00000390462 DDOQ99489 341 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 FEVQ99581 238 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 FAM213AQ9BRX8 229 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 ZNF416Q9BWM5 594 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 ADGRE3Q9BY15 652 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 TRIM2Q9C040 744 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 FANCEQ9HB96 536 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 KCNMB3Q9NPA1 279 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 KLC4Q9NSK0 619 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 MBNL3Q9NUK0 354 aaKnown RBP6.29□□□□□ -1.4
TRAV35-201ENST00000390462 GDAP2Q9NXN4 497 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 TBC1D7Q9P0N9 293 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 PSME2Q9UL46 239 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 GRID1Q9ULK0 1009 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 RIMS2Q9UQ26 1411 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 MRPS7Q9Y2R9 242 aaKnown RBP6.29□□□□□ -1.4
TRAV35-201ENST00000390462 PLCH1Q4KWH8 1693 aa6.29□□□□□ -1.4
TRAV35-201ENST00000390462 PTPN23Q9H3S7 1636 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 MYOM2P54296 1465 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 FAM47DPA6NHR8 397 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 H0Y8G0 127 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 PPIP5K2O43314 1243 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 BUB1O43683 1085 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 RAD51DO75771 328 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 RHOBTB1O94844 696 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 SLITRK3O94933 977 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 ICAM1P05362 532 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 ELANEP08246 267 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 FURINP09958 794 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 RHOXF2BP0C7M4 288 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 DANCRP0C864 163 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 SPP1P10451 314 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 CYP2F1P24903 491 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 CTGFP29279 349 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 OTX2P32243 289 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 CCR1P32246 355 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 ARHGAP25P42331 645 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 LIMS1P48059 325 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 CYP2J2P51589 502 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 TPTEP56180 551 aa6.28□□□□□ -1.4
TRAV35-201ENST00000390462 POLR2LP62875 67 aaKnown RBP6.28□□□□□ -1.4
TRAV35-201ENST00000390462 JAG1P78504 1218 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms