RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 PCTPQ9UKL6 214 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 DMTF1Q9Y222 760 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 RAD51BO15315 384 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 KDELR3O43731 214 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 PRLP01236 227 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 ITGALP20701 1170 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 NR4A1P22736 598 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 AKT1P31749 480 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 IRS1P35568 1242 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 CCR2P41597 374 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 HALP42357 657 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 HK3P52790 923 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 IST1P53990 364 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 HTRA4P83105 476 aaPredicted RBP11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 CHRNB3Q05901 458 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 CD300CQ08708 224 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 MERTKQ12866 999 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 LAPTM5Q13571 262 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 POM121L1PQ3SYA9 428 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 KLHL35Q6PF15 583 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 OR10A6Q8NH74 314 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 CD200R1Q8TD46 325 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 PLD4Q96BZ4 506 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 PYCR2Q96C36 320 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 CCDC138Q96M89 665 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 CEP295NLQ96MC4 621 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 DPY30Q9C005 99 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 RSL24D1Q9UHA3 163 aaKnown RBP11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 CLEC4EQ9ULY5 219 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 MYOFQ9NZM1 2061 aa11.88□□□□□ -0.51
CAPRIN1-202ENST00000389645 PER2O15055 1255 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 SNAP29O95721 258 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 BCL2L1Q07817 233 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 BNIP2Q12982 314 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 GTF2H2Q13888 395 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 FAM174BQ3ZCQ3 159 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 GTF2H2CQ6P1K8 395 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 TCEAL4Q96EI5 215 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 THAP11Q96EK4 314 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 CENPNQ96H22 339 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 ZNF599Q96NL3 588 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 ZFYVE1Q9HBF4 777 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 CCM2LQ9NUG4 571 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 OPTCQ9UBM4 332 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 FXYD1O00168 92 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 FFAR2O15552 330 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 FGF4P08620 206 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 WEE1P30291 646 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 ERVK-8P63133 956 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 RFTN2Q52LD8 501 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 FAM109BQ6ICB4 259 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 CXorf57Q6NSI4 855 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 EFL1Q7Z2Z2 1120 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 ST13P5Q8NFI4 369 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 POF1BQ8WVV4 589 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 BIRC8Q96P09 236 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 TSSK3Q96PN8 268 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 PDFQ9HBH1 243 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 FARSBQ9NSD9 589 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 PKD2L2Q9NZM6 624 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 SELENONQ9NZV5 590 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 ACTR3BQ9P1U1 418 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 CFAP97Q9P2B7 532 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 CD84Q9UIB8 345 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 KNL1Q8NG31 2342 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 MYLKQ15746 1914 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 UPK3BL1B0FP48 263 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 UPK3BL2E5RIL1 263 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 SMAD6O43541 496 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 MTX2O75431 263 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 EFNA1P20827 205 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 SH3BGRP55822 239 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 ARF5P84085 180 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 PPIGQ13427 754 aaKnown RBP eCLIP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 ABRAXAS2Q15018 415 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 SLC14A2Q15849 920 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 PGS1Q32NB8 556 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 CTSL3PQ5NE16 218 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 LILRA6Q6PI73 481 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 CYP20A1Q6UW02 462 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 CHERPQ8IWX8 916 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 BBS7Q8IWZ6 715 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 KLHDC8BQ8IXV7 354 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 AURKBQ96GD4 344 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 ZNF597Q96LX8 424 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 CERS4Q9HA82 394 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 CCL26Q9Y258 94 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 GPR45Q9Y5Y3 372 aa11.87□□□□□ -0.51
CAPRIN1-202ENST00000389645 PRUNE2Q8WUY3 3088 aa11.86□□□□□ -0.51
CAPRIN1-202ENST00000389645 ILVBLA1L0T0 632 aa11.86□□□□□ -0.51
CAPRIN1-202ENST00000389645 KRT87PA6NCN2 255 aa11.86□□□□□ -0.51
CAPRIN1-202ENST00000389645 NOBOXO60393 691 aa11.86□□□□□ -0.51
CAPRIN1-202ENST00000389645 GREM1O60565 184 aa11.86□□□□□ -0.51
CAPRIN1-202ENST00000389645 VPS4BO75351 444 aa11.86□□□□□ -0.51
CAPRIN1-202ENST00000389645 CDK4P11802 303 aa11.86□□□□□ -0.51
CAPRIN1-202ENST00000389645 GSTM4Q03013 218 aa11.86□□□□□ -0.51
CAPRIN1-202ENST00000389645 MAPKAPK3Q16644 382 aa11.86□□□□□ -0.51
CAPRIN1-202ENST00000389645 C5orf22Q49AR2 442 aa11.86□□□□□ -0.51
CAPRIN1-202ENST00000389645 RBM23Q86U06 439 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms