RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 NYNRINQ9P2P1 1898 aaKnown RBP13.63□□□□□ -0.23
SDC1-202ENST00000381150 SLC22A1O15245 554 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 B4GALT3O60512 393 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 RHOBTB1O94844 696 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 KCNK2O95069 426 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 HLA-DQB2P05538 268 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 ASGR1P07306 291 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 BMPR1AP36894 532 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 TUSC3Q13454 348 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 TSNQ15631 228 aaKnown RBP13.63□□□□□ -0.23
SDC1-202ENST00000381150 SCD5Q86SK9 330 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 GALNT10Q86SR1 603 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 LEMD2Q8NC56 503 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 KLHDC9Q8NEP7 349 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 PTCD2Q8WV60 388 aaKnown RBP13.63□□□□□ -0.23
SDC1-202ENST00000381150 MUL1Q969V5 352 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 AURKBQ96GD4 344 aaPredicted RBP13.63□□□□□ -0.23
SDC1-202ENST00000381150 RNF167Q9H6Y7 350 aa13.63□□□□□ -0.23
SDC1-202ENST00000381150 SDR39U1Q9NRG7 319 aaPredicted RBP13.63□□□□□ -0.23
SDC1-202ENST00000381150 XIRP2A4UGR9 3374 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 IRAK2O43187 625 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 SEPT4O43236 478 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 DFNA5O60443 496 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 SLC10A3P09131 477 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 CAP1Q01518 475 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 TRIM71Q2Q1W2 868 aaKnown RBP13.62□□□□□ -0.23
SDC1-202ENST00000381150 MFSD4AQ8N468 514 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 SUSD3Q96L08 255 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 CGREF1Q99674 301 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 ADAM2Q99965 735 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 CARS2Q9HA77 564 aaKnown RBP13.62□□□□□ -0.23
SDC1-202ENST00000381150 KIF17Q9P2E2 1029 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 MYLKQ15746 1914 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 INPPL1O15357 1258 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 UMPSP11172 480 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 PFKLP17858 780 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 CCNCP24863 283 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 HNRNPFP52597 415 aaKnown RBP13.62□□□□□ -0.23
SDC1-202ENST00000381150 PPP5CP53041 499 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 PRKG2Q13237 762 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 ZFP69Q49AA0 526 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 OVOS1Q6IE37 1185 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 DENND5AQ6IQ26 1287 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 C8orf82Q6P1X6 216 aaPredicted RBP13.62□□□□□ -0.23
SDC1-202ENST00000381150 CEP295NLQ96MC4 621 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 TMEM246Q9BRR3 403 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 GMPPBQ9Y5P6 360 aa13.62□□□□□ -0.23
SDC1-202ENST00000381150 BTN3A1O00481 513 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 DYRK3O43781 588 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 MAFKO60675 156 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 OR4F21O95013 312 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 IFI30P13284 250 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 JUNBP17275 347 aaPredicted RBP13.61□□□□□ -0.23
SDC1-202ENST00000381150 GEMP55040 296 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 CAMK2BQ13554 666 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 CLCA4Q14CN2 919 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 TAB1Q15750 504 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 KCNA10Q16322 511 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 ANKS6Q68DC2 871 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 IL27RAQ6UWB1 636 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 METTL23Q86XA0 190 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 LRRC49Q8IUZ0 686 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 LYSMD2Q8IV50 215 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 ATG16L2Q8NAA4 619 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 ZNF641Q96N77 438 aaPredicted RBP13.61□□□□□ -0.23
SDC1-202ENST00000381150 PSD2Q9BQI7 771 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 PLSCR3Q9NRY6 295 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 ERVK13-1Q9NX77 482 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 POLR3HQ9Y535 204 aaPredicted RBP13.61□□□□□ -0.23
SDC1-202ENST00000381150 CCDC162PA2VCL2 907 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 ASPDHA6ND91 283 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 CENPXA8MT69 81 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 CYP2C18P33260 490 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 CASP3P42574 277 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 CLCN5P51795 746 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 NEK5Q6P3R8 708 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 PROSER1Q86XN7 944 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 COQ7Q99807 217 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 SH3GL1Q99961 368 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 KCNS3Q9BQ31 491 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 TRMOQ9BU70 441 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 IRF2BPLQ9H1B7 796 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 PAQR5Q9NXK6 330 aaPredicted RBP13.61□□□□□ -0.23
SDC1-202ENST00000381150 CD274Q9NZQ7 290 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 DKK3Q9UBP4 350 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 INTS6Q9UL03 887 aaKnown RBP13.61□□□□□ -0.23
SDC1-202ENST00000381150 TRIM64A6NGJ6 449 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 AP3D1O14617 1153 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 FFAR3O14843 346 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 GPR42O15529 346 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 AIREO43918 545 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 PAGE1O75459 146 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 RPLP2P05387 115 aaKnown RBP13.61□□□□□ -0.23
SDC1-202ENST00000381150 CDK5R2Q13319 367 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 CCDC58Q4VC31 144 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 FAM26DQ5JW98 314 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 AFMIDQ63HM1 303 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 RTN4RL1Q86UN2 441 aaPredicted RBP13.61□□□□□ -0.23
SDC1-202ENST00000381150 TMEM199Q8N511 208 aa13.61□□□□□ -0.23
SDC1-202ENST00000381150 ZIC5Q96T25 663 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms