RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 METRNLQ641Q3 311 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 KIAA0930Q6ICG6 404 aaPredicted RBP9.03□□□□□ -0.96
HMGN1-202ENST00000380747 MRNIPQ6NTE8 343 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 PCSK4Q6UW60 755 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 TMEM26Q6ZUK4 368 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 TMPRSS9Q7Z410 1059 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 SDCCAG8Q86SQ7 713 aaPredicted RBP9.03□□□□□ -0.96
HMGN1-202ENST00000380747 HOOK3Q86VS8 718 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 JPH3Q8WXH2 748 aaPredicted RBP9.03□□□□□ -0.96
HMGN1-202ENST00000380747 NCSTNQ92542 709 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 ELMO1Q92556 727 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 FGF11Q92914 225 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 GRAMD1AQ96CP6 724 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 STAMBPL1Q96FJ0 436 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 SNF8Q96H20 258 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 SGSM3Q96HU1 749 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 C12orf66Q96MD2 445 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 INSM2Q96T92 566 aaPredicted RBP9.03□□□□□ -0.96
HMGN1-202ENST00000380747 STRADBQ9C0K7 418 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 SEMA6CQ9H3T2 930 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 ZFAND3Q9H8U3 227 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 COG4Q9H9E3 785 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 IL1RAPL1Q9NZN1 696 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 ACSL5Q9ULC5 683 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 SATB2Q9UPW6 733 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 SNX24Q9Y343 169 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 RPS6KL1Q9Y6S9 549 aa9.03□□□□□ -0.96
HMGN1-202ENST00000380747 FAM237BA0A1B0GVD1 139 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 UBA6A0AVT1 1052 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 FAM187AA6NFU0 413 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 LILRA5A6NI73 299 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 IFRD1O00458 451 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 BRINP1O60477 761 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 BANF1O75531 89 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 GSTM1P09488 218 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 TYRP1P17643 537 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 AMD1P17707 334 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 IVDP26440 423 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 ARNTP27540 789 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 CSF2RBP32927 897 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 EPHA4P54764 986 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 CSE1LP55060 971 aaKnown RBP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 EIF3BP55884 814 aaKnown RBP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 GPLD1P80108 840 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 PRR20EP86478 221 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 PRR20CP86479 221 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 PRR20DP86480 221 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 PRR20BP86481 221 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 PRR20AP86496 221 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 GSTM4Q03013 218 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 TLE3Q04726 772 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 CKAP4Q07065 602 aaKnown RBP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 BOP1Q14137 746 aaKnown RBP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 GPR18Q14330 331 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 MORF4L2Q15014 288 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 BRD3Q15059 726 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 PLCL1Q15111 1095 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 CLPPQ16740 277 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 BBS9Q3SYG4 887 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 ANKRD20A4Q4UJ75 823 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 ARMC3Q5W041 872 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 PTRHD1Q6GMV3 140 aaKnown RBP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 NEPROQ6NW34 567 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 XKR5Q6UX68 686 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 NAPRTQ6XQN6 538 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 RAB11FIP2Q7L804 512 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 MAATS1Q7Z4T9 603 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 SLITRK4Q8IW52 837 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 RBM12BQ8IXT5 1001 aaKnown RBP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 AGGF1Q8N302 714 aaeCLIP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 FBXO39Q8N4B4 442 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 GPR150Q8NGU9 434 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 WDR36Q8NI36 951 aaKnown RBP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 SIGLEC10Q96LC7 697 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 CCDC74BQ96LY2 380 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 RMDN2Q96LZ7 410 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 PWWP2AQ96N64 755 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 DPYSL5Q9BPU6 564 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 TSSK1BQ9BXA7 367 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 DPH5Q9H2P9 285 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 POLR1BQ9H9Y6 1135 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 UCK1Q9HA47 277 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 SLC40A1Q9NP59 571 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 C20orf96Q9NUD7 363 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 AKAP7Q9P0M2 348 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-202ENST00000380747 TMEM9Q9P0T7 183 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 KLHL3Q9UH77 587 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 LOXL2Q9Y4K0 774 aa9.02□□□□□ -0.97
HMGN1-202ENST00000380747 BSNQ9UPA5 3926 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 FLNCQ14315 2725 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 IGHV5-10-1A0A0J9YXX1 117 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 A0A1W2PNU3 283 aaPredicted RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 PMS2P1A4D2B8 440 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 IQCF5A8MTL0 148 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 A8MU76 341 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 PRMT5O14744 637 aaPredicted RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 LIN7AO14910 233 aaPredicted RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 PFDN6O15212 129 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 RAD51CO43502 376 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 USP1O94782 785 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms