RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 CARD6Q9BX69 1037 aa16.56■□□□□ 0.24
RER1-202ENST00000378512 ASPSCR1Q9BZE9 553 aa16.56■□□□□ 0.24
RER1-202ENST00000378512 P2RY12Q9H244 342 aa16.56■□□□□ 0.24
RER1-202ENST00000378512 XAB2Q9HCS7 855 aaKnown RBP16.56■□□□□ 0.24
RER1-202ENST00000378512 B3GALT1Q9Y5Z6 326 aa16.56■□□□□ 0.24
RER1-202ENST00000378512 FAM237BA0A1B0GVD1 139 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 RPS3P23396 243 aaKnown RBP eCLIP16.55■□□□□ 0.244e-7■■□□□ 12.1
RER1-202ENST00000378512 IVDP26440 423 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 PTGIRP43119 386 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 PREPP48147 710 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 PPP1CAP62136 330 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 TYSND1Q2T9J0 566 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 RNASEH2BQ5TBB1 312 aaKnown RBP16.55■□□□□ 0.24
RER1-202ENST00000378512 TMEM135Q86UB9 458 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 AGGF1Q8N302 714 aaeCLIP16.55■□□□□ 0.24
RER1-202ENST00000378512 ACVR1CQ8NER5 493 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 TGM7Q96PF1 710 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 CD180Q99467 661 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 NAPGQ99747 312 aaPredicted RBP16.55■□□□□ 0.24
RER1-202ENST00000378512 ZMYND15Q9H091 742 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 DDX47Q9H0S4 455 aaKnown RBP16.55■□□□□ 0.24
RER1-202ENST00000378512 TFB2MQ9H5Q4 396 aaKnown RBP16.55■□□□□ 0.24
RER1-202ENST00000378512 MVB12BQ9H7P6 319 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 SLC39A1Q9NY26 324 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 ANAPC5Q9UJX4 755 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 CDYLQ9Y232 598 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 SAR1BQ9Y6B6 198 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 COL6A6A6NMZ7 2263 aa16.55■□□□□ 0.24
RER1-202ENST00000378512 MAGEB16A2A368 324 aa16.54■□□□□ 0.24
RER1-202ENST00000378512 BHMG1C9JSJ3 638 aaPredicted RBP16.54■□□□□ 0.24
RER1-202ENST00000378512 PRMT5O14744 637 aaPredicted RBP16.54■□□□□ 0.24
RER1-202ENST00000378512 KIF1CO43896 1103 aaKnown RBP16.54■□□□□ 0.24
RER1-202ENST00000378512 GPC4O75487 556 aa16.54■□□□□ 0.24
RER1-202ENST00000378512 ADARP55265 1226 aaKnown RBP16.54■□□□□ 0.24
RER1-202ENST00000378512 PTK6Q13882 451 aa16.54■□□□□ 0.24
RER1-202ENST00000378512 DCAF12Q5T6F0 453 aa16.54■□□□□ 0.24
RER1-202ENST00000378512 LDB1Q86U70 411 aaPredicted RBP16.54■□□□□ 0.24
RER1-202ENST00000378512 FAM129CQ86XR2 697 aa16.54■□□□□ 0.24
RER1-202ENST00000378512 CARFQ8N187 725 aa16.54■□□□□ 0.24
RER1-202ENST00000378512 ELMO1Q92556 727 aa16.54■□□□□ 0.24
RER1-202ENST00000378512 TFGQ92734 400 aaPredicted RBP16.54■□□□□ 0.24
RER1-202ENST00000378512 RNF31Q96EP0 1072 aa16.54■□□□□ 0.24
RER1-202ENST00000378512 SLC41A2Q96JW4 573 aa16.54■□□□□ 0.24
RER1-202ENST00000378512 SIGLEC10Q96LC7 697 aa16.54■□□□□ 0.24
RER1-202ENST00000378512 ZPBPQ9BS86 351 aa16.54■□□□□ 0.24
RER1-202ENST00000378512 KLHL3Q9UH77 587 aa16.54■□□□□ 0.24
RER1-202ENST00000378512 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.54■□□□□ 0.24
RER1-202ENST00000378512 ZCWPW2A0A1B0GU75 182 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 SDR42E2A6NKP2 422 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 B8ZZF3 427 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 F8W8V4 182 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 IFRD1O00458 451 aaPredicted RBP16.53■□□□□ 0.24
RER1-202ENST00000378512 VAPBO95292 243 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 FAM87AP0C7U9 286 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 NELFEP18615 380 aaKnown RBP16.53■□□□□ 0.24
RER1-202ENST00000378512 CCR7P32248 378 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 PPM1FP49593 454 aaPredicted RBP16.53■□□□□ 0.24
RER1-202ENST00000378512 NFKB2Q00653 900 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 PLCL1Q15111 1095 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 ANKS6Q68DC2 871 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 ZNF449Q6P9G9 518 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 CES3Q6UWW8 571 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 CEACAM20Q6UY09 585 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 LRRC6Q86X45 466 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 PPIL6Q8IXY8 311 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 LKAAEAR1Q8TD35 194 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 UBXN4Q92575 508 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 NKD1Q969G9 470 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 TCF12Q99081 682 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 CTRCQ99895 268 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 APMAPQ9HDC9 416 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 HRASLS2Q9NWW9 162 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 RNF14Q9UBS8 474 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 TMEM184BQ9Y519 407 aaPredicted RBP16.53■□□□□ 0.24
RER1-202ENST00000378512 IGHV5-51A0A0C4DH38 117 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 CTAGE9A4FU28 777 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 TLCD2A6NGC4 264 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 STMND1H3BQB6 276 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 J3QKU1 62 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 DNALI1O14645 258 aaPredicted RBP16.53■□□□□ 0.24
RER1-202ENST00000378512 SLCO2B1O94956 709 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 ANKRD20A4Q4UJ75 823 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 CACHD1Q5VU97 1274 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 IRGCQ6NXR0 463 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 FAM92BQ6ZTR7 304 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 OOSP2Q86WS3 158 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 KMT5CQ86Y97 462 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 SLC22A15Q8IZD6 547 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 OR52E1Q8NGJ3 308 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 LPGAT1Q92604 370 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 BIRC8Q96P09 236 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 FERD3LQ96RJ6 166 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 TRIM56Q9BRZ2 755 aaKnown RBP16.53■□□□□ 0.24
RER1-202ENST00000378512 PILRAQ9UKJ1 303 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 PCDHB11Q9Y5F2 797 aa16.53■□□□□ 0.24
RER1-202ENST00000378512 SNRNP200O75643 2136 aaKnown RBP16.52■□□□□ 0.24
RER1-202ENST00000378512 MATN2O00339 956 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 TPBGLP0DKB5 382 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 OGNP20774 298 aaKnown RBP16.52■□□□□ 0.23
RER1-202ENST00000378512 AOAHP28039 575 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms