RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ID2Q02363 134 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 CACNG1Q06432 222 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 LPAL2Q16609 132 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 KCTD11Q693B1 232 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 GRAMD4Q6IC98 578 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 SETD3Q86TU7 594 aaPredicted RBP7.96□□□□□ -1.14
CKAP2-203ENST00000378037 ZSWIM9Q86XI8 627 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 VRK3Q8IV63 474 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 FAM120BQ96EK7 910 aaKnown RBP7.96□□□□□ -1.14
CKAP2-203ENST00000378037 PHF12Q96QT6 1004 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 CENPKQ9BS16 269 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 SORBS1Q9BX66 1292 aaKnown RBP7.96□□□□□ -1.14
CKAP2-203ENST00000378037 STN1Q9H668 368 aaKnown RBP7.96□□□□□ -1.14
CKAP2-203ENST00000378037 HEBP1Q9NRV9 189 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 DDX18Q9NVP1 670 aaKnown RBP7.96□□□□□ -1.14
CKAP2-203ENST00000378037 OGDHLQ9ULD0 1010 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 EIF3LQ9Y262 564 aaKnown RBP7.96□□□□□ -1.14
CKAP2-203ENST00000378037 FRYLO94915 3013 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 IFRD1O00458 451 aaPredicted RBP7.96□□□□□ -1.14
CKAP2-203ENST00000378037 BIRC5O15392 142 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 RASSF9O75901 435 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 F11P03951 625 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 C8orf89P0DMQ9 161 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 PAX7P23759 505 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 PRIM2P49643 509 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 LSM3P62310 102 aaKnown RBP7.96□□□□□ -1.14
CKAP2-203ENST00000378037 SLC34A1Q06495 639 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 KLC1Q07866 573 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 TP53BP2Q13625 1128 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 FRG1Q14331 258 aaKnown RBP7.96□□□□□ -1.14
CKAP2-203ENST00000378037 HKDC1Q2TB90 917 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 TMEM240Q5SV17 173 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 CACHD1Q5VU97 1274 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 CHRDL2Q6WN34 429 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 DHFR2Q86XF0 187 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 LIX1Q8N485 282 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 METTL27Q8N6F8 245 aaPredicted RBP7.96□□□□□ -1.14
CKAP2-203ENST00000378037 DCAF4L2Q8NA75 395 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 SPPL3Q8TCT6 385 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 OR8D1Q8WZ84 308 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 C1orf74Q96LT6 269 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 LRMDAQ9H2I8 198 aa7.96□□□□□ -1.14
CKAP2-203ENST00000378037 INTS7Q9NVH2 962 aaKnown RBP7.96□□□□□ -1.14
CKAP2-203ENST00000378037 FEZF1A0PJY2 475 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 TRBC1P01850 177 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 AQP4P55087 323 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 LCP2Q13094 533 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 ACAP2Q15057 778 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 UNC50Q53HI1 259 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 TECRLQ5HYJ1 363 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 ZCCHC8Q6NZY4 707 aaKnown RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 SPESP1Q6UW49 350 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 SYVN1Q86TM6 617 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 MICU2Q8IYU8 434 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 CPA6Q8N4T0 437 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 CCDC126Q96EE4 140 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 PGAP3Q96FM1 320 aaPredicted RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 PANX1Q96RD7 426 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 SGK2Q9HBY8 427 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 SARDHQ9UL12 918 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 SH3GLB1Q9Y371 365 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 CKAP5Q14008 2032 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 PRAMEF33A0A0G2JMD5 474 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 PNMA8CA0A1B0GUJ8 204 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 MATN2O00339 956 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 MYO1DO94832 1006 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 KRT6AP02538 564 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 CATP04040 527 aaKnown RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 KRT6BP04259 564 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 CD1DP15813 335 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 CYP2A7P20853 494 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 IL10P22301 178 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 PRKACGP22612 351 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 LHCGRP22888 699 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 MAGEA10P43363 369 aaPredicted RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 GNPDA1P46926 289 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 KRT6CP48668 564 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 RAB8AP61006 207 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 ABRAXAS2Q15018 415 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 NEDD8Q15843 81 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 FAM78AQ5JUQ0 283 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 SPANXN4Q5MJ08 99 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 RNF220Q5VTB9 566 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 CAPRIN2Q6IMN6 1127 aaKnown RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 LIMS2Q7Z4I7 341 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 ZC3H7AQ8IWR0 971 aaKnown RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 ACDQ96AP0 544 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 EXOSC8Q96B26 276 aaKnown RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 TRMT61BQ9BVS5 477 aaKnown RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 TMEM245Q9H330 911 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 ARHGEF3Q9NR81 526 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 KIF17Q9P2E2 1029 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 GULP1Q9UBP9 304 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 ANKRD6Q9Y2G4 727 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 MAP4K5Q9Y4K4 846 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 ZNF318Q5VUA4 2279 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 OTOL1A6NHN0 477 aaPredicted RBP7.95□□□□□ -1.14
CKAP2-203ENST00000378037 PRRT4C9JH25 899 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 H0Y8X5 98 aa7.95□□□□□ -1.14
CKAP2-203ENST00000378037 hCG_2039718K7EN88 272 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms