RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 ADPRHL2Q9NX46 363 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 ZNF221Q9UK13 617 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 EIF3LQ9Y262 564 aaKnown RBP15.6■□□□□ 0.09
CKAP4-201ENST00000378026 COMMD10Q9Y6G5 202 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 LDB2O43679 373 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 ZNF682O95780 498 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 SLC2A4P14672 509 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 GBX1Q14549 363 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 AP5B1Q2VPB7 878 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 FAM174BQ3ZCQ3 159 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 FAM209AQ5JX71 171 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 PRSS36Q5K4E3 855 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 RHEBL1Q8TAI7 183 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 KIAA1191Q96A73 305 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 REXO5Q96IC2 774 aaKnown RBP15.6■□□□□ 0.09
CKAP4-201ENST00000378026 SENP8Q96LD8 212 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 AGO3Q9H9G7 860 aaKnown RBP15.6■□□□□ 0.09
CKAP4-201ENST00000378026 ZFP14Q9HCL3 533 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 PCTPQ9UKL6 214 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 SNX6Q9UNH7 406 aa15.6■□□□□ 0.09
CKAP4-201ENST00000378026 ISPDA4D126 451 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 HAPLN1P10915 354 aaPredicted RBP15.59■□□□□ 0.09
CKAP4-201ENST00000378026 HOXD8P13378 290 aaPredicted RBP15.59■□□□□ 0.09
CKAP4-201ENST00000378026 PGFP49763 221 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 ERVPABLB-1P60509 514 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 ZNF181Q2M3W8 571 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 PAN2Q504Q3 1202 aaKnown RBP15.59■□□□□ 0.09
CKAP4-201ENST00000378026 MARC1Q5VT66 337 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 TIGD7Q6NT04 549 aaPredicted RBP15.59■□□□□ 0.09
CKAP4-201ENST00000378026 MRNIPQ6NTE8 343 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 CEP68Q76N32 757 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 GALNT10Q86SR1 603 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 LACC1Q8IV20 430 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 SIX5Q8N196 739 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 DPP10Q8N608 796 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 FUBP1Q96AE4 644 aaKnown RBP15.59■□□□□ 0.09
CKAP4-201ENST00000378026 ZFYVE19Q96K21 471 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 PDGFDQ9GZP0 370 aaPredicted RBP15.59■□□□□ 0.09
CKAP4-201ENST00000378026 DUSP21Q9H596 190 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 CDH9Q9ULB4 789 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 GPSM3Q9Y4H4 160 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 PCDHGB1Q9Y5G3 927 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 TSC2P49815 1807 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 NTRK1P04629 796 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 RPS17P08708 135 aaKnown RBP15.59■□□□□ 0.09
CKAP4-201ENST00000378026 CHRNB1P11230 501 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 MYCLP1P12525 358 aaPredicted RBP15.59■□□□□ 0.09
CKAP4-201ENST00000378026 GADD45AP24522 165 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 ACVR2AP27037 513 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 S100A5P33763 92 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 ADCYAP1R1P41586 468 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 RPL38P63173 70 aaKnown RBP15.59■□□□□ 0.09
CKAP4-201ENST00000378026 GRIK2Q13002 908 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 SGO1Q5FBB7 561 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 LETMD1Q6P1Q0 360 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 LINC00299Q6ZSB3 139 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 FKBP9P1Q75LS8 142 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 DPP9Q86TI2 863 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 C10orf111Q8N326 155 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 OR56A4Q8NGH8 313 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 IMP4Q96G21 291 aaKnown RBP15.59■□□□□ 0.09
CKAP4-201ENST00000378026 CYP2S1Q96SQ9 504 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 M0QX08 132 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 EIF3FO00303 357 aaPredicted RBP15.59■□□□□ 0.09
CKAP4-201ENST00000378026 SLC16A6O15403 523 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 RAD51Q06609 339 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 ZNF33AQ06730 810 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 MAPKAPK3Q16644 382 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 FAM214AQ32MH5 1076 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 CARD16Q5EG05 197 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 TOP6BLQ8N6T0 577 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 TP53INP1Q96A56 240 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 AARSD1Q9BTE6 412 aaKnown RBP15.59■□□□□ 0.09
CKAP4-201ENST00000378026 GORASP2Q9H8Y8 452 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 PLSCR3Q9NRY6 295 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 CATSPERZQ9NTU4 200 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 NEUROG3Q9Y4Z2 214 aa15.59■□□□□ 0.09
CKAP4-201ENST00000378026 A0A096LPI6 279 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 PABPN1LA6NDY0 278 aaKnown RBP15.58■□□□□ 0.08
CKAP4-201ENST00000378026 MROH6A6NGR9 719 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 CREG1O75629 220 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 C21orf33P30042 268 aaPredicted RBP15.58■□□□□ 0.08
CKAP4-201ENST00000378026 TGFBR2P37173 567 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 OR2B6P58173 313 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 CYP4F2P78329 520 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 CCDC58Q4VC31 144 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 SNAP47Q5SQN1 464 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 ATAD3CQ5T2N8 411 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 SETD9Q8NE22 299 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 SLC13A3Q8WWT9 602 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 PSMG2Q969U7 264 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 HMCESQ96FZ2 354 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 YME1L1Q96TA2 773 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 C16orf70Q9BSU1 422 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 AGO1Q9UL18 857 aaKnown RBP15.58■□□□□ 0.08
CKAP4-201ENST00000378026 DOCK1Q14185 1865 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 MEIS3P2A8K0S8 358 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 hCG_2039718K7EN88 272 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 TNFRSF10AO00220 468 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 CCRL2O00421 344 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms