RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SIRPB2Q5JXA9 342 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 PIK3R6Q5UE93 754 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 BRAT1Q6PJG6 821 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 HFE2Q6ZVN8 426 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 LRRTM4Q86VH4 590 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 ZSCAN5AQ9BUG6 496 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 J3KR12 359 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 KERAO60938 352 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 HSD17B2P37059 387 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 YAP1P46937 504 aaKnown RBP13.41□□□□□ -0.26
GPC6-201ENST00000377047 NCBP2P52298 156 aaKnown RBP eCLIP13.41□□□□□ -0.267e-8■□□□□ 9.2
GPC6-201ENST00000377047 CAMK1Q14012 370 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 IKBIPQ70UQ0 350 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 Q8N9G6 341 aaPredicted RBP13.41□□□□□ -0.26
GPC6-201ENST00000377047 KCTD13Q8WZ19 329 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 SIX2Q9NPC8 291 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 UGT2B11O75310 529 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 SOD2P04179 222 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 NDUFS1P28331 727 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 CASRP41180 1078 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 CHRNA6Q15825 494 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 MYLK3Q32MK0 819 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 KIAA0930Q6ICG6 404 aaPredicted RBP13.41□□□□□ -0.26
GPC6-201ENST00000377047 OR2AP1Q8NGE2 309 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 AGAP11Q8TF27 550 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 OSBPL11Q9BXB4 747 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 MCCC2Q9HCC0 563 aa13.41□□□□□ -0.26
GPC6-201ENST00000377047 MAGEB17A8MXT2 336 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 LEFTY2O00292 366 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 KHKP50053 298 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 CDK9P50750 372 aaKnown RBP13.4□□□□□ -0.26
GPC6-201ENST00000377047 CLCNKAP51800 687 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 ZHX1-C8orf76Q96EF9 292 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 CCM2Q9BSQ5 444 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 KLHL31Q9H511 634 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 RB1P06400 928 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 HAPLN1P10915 354 aaPredicted RBP13.4□□□□□ -0.26
GPC6-201ENST00000377047 CLCN7P51798 805 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 LIPEQ05469 1076 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 OSTM1Q86WC4 334 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 FSTL5Q8N475 847 aaPredicted RBP13.4□□□□□ -0.26
GPC6-201ENST00000377047 FAM81AQ8TBF8 368 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 FAM110BQ8TC76 370 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 RASSF1Q9NS23 344 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 MCUBQ9NWR8 336 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 C1orf109Q9NX04 203 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 IL12RB1P42701 662 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 GPR33Q49SQ1 333 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 NCBP2-AS2Q69YL0 99 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 PAOXQ6QHF9 649 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 TMPRSS11AQ6ZMR5 421 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 ZNF781Q8N8C0 355 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 TMEM145Q8NBT3 493 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 PIGXQ8TBF5 258 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 IRF7Q92985 503 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 SLC38A4Q969I6 547 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 RNF31Q96EP0 1072 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 PRPS2P11908 318 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 NELFEP18615 380 aaKnown RBP13.4□□□□□ -0.26
GPC6-201ENST00000377047 IGFBP5P24593 272 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 ANO7Q6IWH7 933 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 TWNKQ96RR1 684 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 SALL4Q9UJQ4 1053 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 CLCA3PQ9Y6N3 262 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 A0A0J9YVX5 310 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 NIPSNAP2O75323 286 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 KCNE1P15382 129 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 RBBP4Q09028 425 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 MIPEPQ99797 713 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 ZNF446Q9NWS9 450 aa13.4□□□□□ -0.26
GPC6-201ENST00000377047 RUVBL1Q9Y265 456 aaKnown RBP13.4□□□□□ -0.26
GPC6-201ENST00000377047 GPC6Q9Y625 555 aaPredicted RBP13.4□□□□□ -0.26
GPC6-201ENST00000377047 SNED1Q8TER0 1413 aa13.4□□□□□ -0.27
GPC6-201ENST00000377047 MTMR11A4FU01 709 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 FADS2P1A8MWK0 482 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 STX16-NPEPL1H3BU86 382 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 STX16O14662 325 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 CLUP10909 449 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 IL7RP16871 459 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 AHCYP23526 432 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 NRG3P56975 720 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 TAS2R39P59534 338 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 FOLH1Q04609 750 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 C8orf48Q96LL4 319 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 GSDMCQ9BYG8 508 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 COMMD9Q9P000 198 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 AJAP1Q9UKB5 411 aaPredicted RBP13.39□□□□□ -0.27
GPC6-201ENST00000377047 CDC14AQ9UNH5 594 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 K7EPI3 171 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 TULP2O00295 520 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 GNB5O14775 395 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 HCN1O60741 890 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 SEC24AO95486 1093 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 FADS2O95864 444 aaKnown RBP13.39□□□□□ -0.27
GPC6-201ENST00000377047 HLA-EP13747 358 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 PLGLB1Q02325 96 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 SLBPQ14493 270 aaKnown RBP eCLIP13.39□□□□□ -0.27
GPC6-201ENST00000377047 MPP5Q8N3R9 675 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 OR2T34Q8NGX1 318 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 OR2T3Q8NH03 318 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms