RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TLR10Q9BXR5 811 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 OR52A5Q9H2C5 316 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 C1GALT1Q9NS00 363 aa20.46■□□□□ 0.87
VSX1-201ENST00000376707 R3HDM2Q9Y2K5 976 aaKnown RBP20.46■□□□□ 0.87
VSX1-201ENST00000376707 TRBV5-4A0A0C4DH59 114 aa20.45■□□□□ 0.86
VSX1-201ENST00000376707 TCRBV7S2A1N4TA0A589 114 aa20.45■□□□□ 0.86
VSX1-201ENST00000376707 H7C0S8 307 aa20.45■□□□□ 0.86
VSX1-201ENST00000376707 NR1D1P20393 614 aa20.45■□□□□ 0.86
VSX1-201ENST00000376707 RPS18P62269 152 aaKnown RBP20.45■□□□□ 0.86
VSX1-201ENST00000376707 CACNG1Q06432 222 aa20.45■□□□□ 0.86
VSX1-201ENST00000376707 KLRB1Q12918 225 aa20.45■□□□□ 0.86
VSX1-201ENST00000376707 TCTN3Q6NUS6 607 aa20.45■□□□□ 0.86
VSX1-201ENST00000376707 LATS2Q9NRM7 1088 aa20.45■□□□□ 0.86
VSX1-201ENST00000376707 GOLGA6L6A8MZA4 724 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 PSMD3O43242 534 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 MAP3K7O43318 606 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 KLK3P07288 261 aaPredicted RBP20.44■□□□□ 0.86
VSX1-201ENST00000376707 PRSS56P0CW18 603 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 CD151P48509 253 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 GDF10P55107 478 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 RPA4Q13156 261 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 UGT8Q16880 541 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 MICALCLQ6ZW33 695 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 SYVN1Q86TM6 617 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 TAB3Q8N5C8 712 aaPredicted RBP20.44■□□□□ 0.86
VSX1-201ENST00000376707 CLDN19Q8N6F1 224 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 PHC3Q8NDX5 983 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 STYXQ8WUJ0 223 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 CPT1BQ92523 772 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 CDKN2AIPNLQ96HQ2 116 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 TMEM121Q9BTD3 319 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 TSGA10Q9BZW7 698 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 MVB12BQ9H7P6 319 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 PIH1D1Q9NWS0 290 aaKnown RBP20.44■□□□□ 0.86
VSX1-201ENST00000376707 TLK1Q9UKI8 766 aa20.44■□□□□ 0.86
VSX1-201ENST00000376707 FARSAQ9Y285 508 aaKnown RBP20.44■□□□□ 0.86
VSX1-201ENST00000376707 UBR5O95071 2799 aaPredicted RBP20.43■□□□□ 0.86
VSX1-201ENST00000376707 K7EM74 188 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 BTN3A1O00481 513 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 AP2A1O95782 977 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 GSTM1P09488 218 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 PDHA2P29803 388 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 PRDX3P30048 256 aaKnown RBP20.43■□□□□ 0.86
VSX1-201ENST00000376707 PREPP48147 710 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 GSDMDP57764 484 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 FOXK1P85037 733 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 GSTM4Q03013 218 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 GPS2Q13227 327 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 IGFBP7Q16270 282 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 DBN1Q16643 649 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 ZNF658BQ4V348 819 aaPredicted RBP20.43■□□□□ 0.86
VSX1-201ENST00000376707 COLEC12Q5KU26 742 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 ASB18Q6ZVZ8 466 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 APLFQ8IW19 511 aaPredicted RBP20.43■□□□□ 0.86
VSX1-201ENST00000376707 PIANPQ8IYJ0 282 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 TEX19Q8NA77 164 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 OR52E1Q8NGJ3 308 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 THAP4Q8WY91 577 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 TFGQ92734 400 aaPredicted RBP20.43■□□□□ 0.86
VSX1-201ENST00000376707 CLIP3Q96DZ5 547 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 HGH1Q9BTY7 390 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 TFB2MQ9H5Q4 396 aaKnown RBP20.43■□□□□ 0.86
VSX1-201ENST00000376707 SYTL2Q9HCH5 934 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 SMARCAL1Q9NZC9 954 aa20.43■□□□□ 0.86
VSX1-201ENST00000376707 CCDC78A2IDD5 438 aa20.42■□□□□ 0.86
VSX1-201ENST00000376707 BTN3A3O00478 584 aa20.42■□□□□ 0.86
VSX1-201ENST00000376707 AP2A2O94973 939 aa20.42■□□□□ 0.86
VSX1-201ENST00000376707 PRKG2Q13237 762 aa20.42■□□□□ 0.86
VSX1-201ENST00000376707 SEMA5AQ13591 1074 aa20.42■□□□□ 0.86
VSX1-201ENST00000376707 AMIGO1Q86WK6 493 aa20.42■□□□□ 0.86
VSX1-201ENST00000376707 SLC38A9Q8NBW4 561 aa20.42■□□□□ 0.86
VSX1-201ENST00000376707 LRFN5Q96NI6 719 aa20.42■□□□□ 0.86
VSX1-201ENST00000376707 FRMD8P1Q9BZ68 369 aaPredicted RBP20.42■□□□□ 0.86
VSX1-201ENST00000376707 CHST8Q9H2A9 424 aa20.42■□□□□ 0.86
VSX1-201ENST00000376707 C2orf74A8MZ97 194 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 TMEM150CB9EJG8 249 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 MEN1O00255 615 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 QSOX1O00391 747 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 KRT86O43790 486 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 DNAJB5O75953 348 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 ST6GAL1P15907 406 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 CYP2A7P20853 494 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 PSMA3P25788 255 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 MSNP26038 577 aaKnown RBP20.41■□□□□ 0.86
VSX1-201ENST00000376707 STIP1P31948 543 aaKnown RBP20.41■□□□□ 0.86
VSX1-201ENST00000376707 NSG1P42857 185 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 ABRQ12979 859 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 BOP1Q14137 746 aaKnown RBP20.41■□□□□ 0.86
VSX1-201ENST00000376707 OASLQ15646 514 aaKnown RBP20.41■□□□□ 0.86
VSX1-201ENST00000376707 PRAMEF17Q5VTA0 474 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 IZUMO3Q5VZ72 239 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 ZNF517Q6ZMY9 492 aaPredicted RBP20.41■□□□□ 0.86
VSX1-201ENST00000376707 LINC00523Q86TU6 105 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 NRTNQ99748 197 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 PITPNM3Q9BZ71 974 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 XKR8Q9H6D3 395 aa20.41■□□□□ 0.86
VSX1-201ENST00000376707 MROH6A6NGR9 719 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 LIN7AO14910 233 aaPredicted RBP20.4■□□□□ 0.86
VSX1-201ENST00000376707 GAS8O95995 478 aa20.4■□□□□ 0.86
VSX1-201ENST00000376707 FTH1P02794 183 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms