RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ORC6Q9Y5N6 252 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 GBF1Q92538 1859 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 CASTOR2A6NHX0 329 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 PARNO95453 639 aaKnown RBP16.23■□□□□ 0.19
TRIM39-201ENST00000376656 MAGP20916 626 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 ST13P50502 369 aaKnown RBP16.23■□□□□ 0.19
TRIM39-201ENST00000376656 VAC14Q08AM6 782 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 IL18R1Q13478 541 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 GBX1Q14549 363 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 AP5B1Q2VPB7 878 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 C18orf21Q32NC0 220 aaPredicted RBP16.23■□□□□ 0.19
TRIM39-201ENST00000376656 GTDC1Q4AE62 458 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 TIGD5Q53EQ6 642 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 COLEC12Q5KU26 742 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 SCD5Q86SK9 330 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 PLD3Q8IV08 490 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 SLC22A15Q8IZD6 547 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 SLC13A3Q8WWT9 602 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 GTF2H4Q92759 462 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 CDKN2AIPNLQ96HQ2 116 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 GAD1Q99259 594 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 NMUR1Q9HB89 426 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 TMEM45AQ9NWC5 275 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 OSGIN1Q9UJX0 560 aa16.23■□□□□ 0.19
TRIM39-201ENST00000376656 DLGAP3O95886 979 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 NTRK1P04629 796 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 PTPN2P17706 415 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 PCSK1P29120 753 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 CDKN1CP49918 316 aaPredicted RBP16.22■□□□□ 0.19
TRIM39-201ENST00000376656 PTGR1Q14914 329 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 MSANTD2Q6P1R3 559 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 LACC1Q8IV20 430 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 POC5Q8NA72 575 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 SIDT2Q8NBJ9 832 aaKnown RBP16.22■□□□□ 0.19
TRIM39-201ENST00000376656 TPRKBQ9Y3C4 175 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 WASH4PA8MWX3 477 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 MUSKO15146 869 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 RFPL2O75678 378 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 CNPP09543 421 aaKnown RBP16.22■□□□□ 0.19
TRIM39-201ENST00000376656 IGFBP5P24593 272 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 ADAM17P78536 824 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 STEAP3Q658P3 488 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 PRSS48Q7RTY5 328 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 LRRTM3Q86VH5 581 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 PYCR2Q96C36 320 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 ZNF382Q96SR6 550 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 CPA4Q9UI42 421 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 PKP3Q9Y446 797 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 TSPAN12O95859 305 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 GSNP06396 782 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 ITGAMP11215 1152 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 JUNDP17535 347 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 GGT5P36269 586 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 CLK3P49761 638 aaKnown RBP16.22■□□□□ 0.19
TRIM39-201ENST00000376656 FCGRTP55899 365 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 CACNB2Q08289 660 aaPredicted RBP16.22■□□□□ 0.19
TRIM39-201ENST00000376656 RAVER1Q8IY67 606 aaKnown RBP16.22■□□□□ 0.19
TRIM39-201ENST00000376656 TEX26Q8N6G2 289 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 FAM83FQ8NEG4 500 aaPredicted RBP16.22■□□□□ 0.19
TRIM39-201ENST00000376656 ZHX1-C8orf76Q96EF9 292 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 EPS8L2Q9H6S3 715 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 ACOT13Q9NPJ3 140 aa16.22■□□□□ 0.19
TRIM39-201ENST00000376656 DCAF13Q9NV06 445 aaKnown RBP16.22■□□□□ 0.19
TRIM39-201ENST00000376656 TREHO43280 583 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 SERPINA1P01009 418 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 HOXD8P13378 290 aaPredicted RBP16.21■□□□□ 0.19
TRIM39-201ENST00000376656 MSH3P20585 1137 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 PTPRNQ16849 979 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 FAM174BQ3ZCQ3 159 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 NEK10Q6ZWH5 1172 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 FKBP9P1Q75LS8 142 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 GPSM1Q86YR5 675 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 C10orf111Q8N326 155 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 ZNF540Q8NDQ6 660 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 BRSK1Q8TDC3 778 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 NETO1Q8TDF5 533 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 EEF1AKMT1Q8WVE0 214 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 LPPQ93052 612 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 TP63Q9H3D4 680 aaPredicted RBP16.21■□□□□ 0.19
TRIM39-201ENST00000376656 KAT8Q9H7Z6 458 aaKnown RBP16.21■□□□□ 0.19
TRIM39-201ENST00000376656 PRDM8Q9NQV8 689 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.21■□□□□ 0.19
TRIM39-201ENST00000376656 MBLAC1A4D2B0 266 aaPredicted RBP16.21■□□□□ 0.19
TRIM39-201ENST00000376656 ARVCFO00192 962 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 NIPSNAP2O75323 286 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 CREG1O75629 220 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 SCELO95171 688 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 LCKP06239 509 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 CD36P16671 472 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 TGFBR2P37173 567 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 PHC1P78364 1004 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 ABRAXAS2Q15018 415 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 ZC3H12BQ5HYM0 836 aaKnown RBP16.21■□□□□ 0.19
TRIM39-201ENST00000376656 GCNT7Q6ZNI0 430 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 UTS2BQ765I0 119 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 LRRC8DQ7L1W4 858 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 HIPK1Q86Z02 1210 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 ZNF486Q96H40 463 aaPredicted RBP16.21■□□□□ 0.19
TRIM39-201ENST00000376656 OPTCQ9UBM4 332 aa16.21■□□□□ 0.19
TRIM39-201ENST00000376656 TSR3Q9UJK0 312 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms